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IVF0003204 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003204
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionExtensin-3-like
Genome locationchr03:4850720..4851421
RNA-Seq ExpressionIVF0003204
SyntenyIVF0003204
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058946.1 extensin-3-like [Cucumis melo var. makuwa]2.51e-78100Show/hide
Query:  MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLP
        MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLP
Subjt:  MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLP

Query:  QQAKKLHMSGARQAAPAPPP
        QQAKKLHMSGARQAAPAPPP
Subjt:  QQAKKLHMSGARQAAPAPPP

KAA0058948.1 extensin-3-like [Cucumis melo var. makuwa]5.57e-3566.35Show/hide
Query:  MPPTTKPIVPYHPFIIPPPFKKT-SKHTWSPSSRP-QKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLPQQAKKLHMSGARQAAPAPPPVRPP
        MP  T+PIVPYHPFI PPPFKK   +HTW P   P Q++L RPIVPYYPYKF PPP RK A+PP  YH FPP TLP  AKKL+MS  R+AAP PPP +P 
Subjt:  MPPTTKPIVPYHPFIIPPPFKKT-SKHTWSPSSRP-QKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLPQQAKKLHMSGARQAAPAPPPVRPP

Query:  YVWP
        Y WP
Subjt:  YVWP

KAE8647164.1 hypothetical protein Csa_018816, partial [Cucumis sativus]2.49e-4563.85Show/hide
Query:  MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRP--QKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRT
        M LLS NLPSN A H IP SLLSPP MPP T+PIVP+HPF  P PF+KT +HTW P   P  Q+EL RPIVPY+PYKF PPP RK A+PPP YH FPP  
Subjt:  MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRP--QKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRT

Query:  LPQQAKKLHMSGARQAAPAPPPVRPPYVWP
        L   A+KL+MS  R+A P PPP++P Y WP
Subjt:  LPQQAKKLHMSGARQAAPAPPPVRPPYVWP

TYK10982.1 extensin-3-like [Cucumis melo var. makuwa]3.35e-77100Show/hide
Query:  MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLP
        MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLP
Subjt:  MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLP

Query:  QQAKKLHMSGARQAAPAPPP
        QQAKKLHMSGARQAAPAPPP
Subjt:  QQAKKLHMSGARQAAPAPPP

XP_008466986.1 PREDICTED: extensin-3-like, partial [Cucumis melo]1.99e-5072.22Show/hide
Query:  MELHNHIFVFVLFIIMPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKT-SKHTWSPSSRP-QKELGRPIVPYYPYKFLPPPYRK
        ME HN IFVF LFII+PLLS NLPSNFA HYIP SLLSPP MP  T+PIVPYHPFI PPPFKK   +HTW P   P Q++L RPIVPYYPYKF PPP RK
Subjt:  MELHNHIFVFVLFIIMPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKT-SKHTWSPSSRP-QKELGRPIVPYYPYKFLPPPYRK

Query:  HAHPPPGYHVFPPRTLPQQAKKLHMS
         A+PP  YH FPP TLP  AKKL+MS
Subjt:  HAHPPPGYHVFPPRTLPQQAKKLHMS

TrEMBL top hitse value%identityAlignment
A0A0A0KD80 Uncharacterized protein3.8e-4263.92Show/hide
Query:  MELHNHIFVFVLFIIMPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRP--QKELGRPIVPYYPYKFLPPPYRK
        ME  N IFVF LFIIM LLS NLPSN A H IP SLLSPP MPP T+PIVP+HPF  P PF+KT +HTW P   P  Q+EL RPIVPY+PYKF PPP RK
Subjt:  MELHNHIFVFVLFIIMPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRP--QKELGRPIVPYYPYKFLPPPYRK

Query:  HAHPPPGYHVFPPRTLPQQAKKLHMSGARQAAPAPPPVRPPYVWPPKWIRRNSTPPPF
         A+PPP YH FPP  L   A+KL+MS  R+A P PPP++ PY WP   IR+ S PPPF
Subjt:  HAHPPPGYHVFPPRTLPQQAKKLHMSGARQAAPAPPPVRPPYVWPPKWIRRNSTPPPF

A0A1S3CSG8 extensin-3-like5.1e-3972.22Show/hide
Query:  MELHNHIFVFVLFIIMPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKT-SKHTW-SPSSRPQKELGRPIVPYYPYKFLPPPYRK
        ME HN IFVF LFII+PLLS NLPSNFA HYIP SLLSPP MP  T+PIVPYHPFI PPPFKK   +HTW  P   PQ++L RPIVPYYPYKF PPP RK
Subjt:  MELHNHIFVFVLFIIMPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKT-SKHTW-SPSSRPQKELGRPIVPYYPYKFLPPPYRK

Query:  HAHPPPGYHVFPPRTLPQQAKKLHMS
         A+PP  YH FPP TLP  AKKL+MS
Subjt:  HAHPPPGYHVFPPRTLPQQAKKLHMS

A0A5A7UXN4 Extensin-3-like8.6e-63100Show/hide
Query:  MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLP
        MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLP
Subjt:  MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLP

Query:  QQAKKLHMSGARQAAPAPPP
        QQAKKLHMSGARQAAPAPPP
Subjt:  QQAKKLHMSGARQAAPAPPP

A0A5D3CI60 Extensin-3-like8.6e-63100Show/hide
Query:  MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLP
        MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLP
Subjt:  MPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLP

Query:  QQAKKLHMSGARQAAPAPPP
        QQAKKLHMSGARQAAPAPPP
Subjt:  QQAKKLHMSGARQAAPAPPP

A0A5D3CVI1 Extensin-3-like7.6e-2766.35Show/hide
Query:  MPPTTKPIVPYHPFIIPPPFKKT-SKHTW-SPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLPQQAKKLHMSGARQAAPAPPPVRPP
        MP  T+PIVPYHPFI PPPFKK   +HTW  P   PQ++L RPIVPYYPYKF PPP RK A+PP  YH FPP TLP  AKKL+MS  R+AAP PPP + P
Subjt:  MPPTTKPIVPYHPFIIPPPFKKT-SKHTW-SPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFPPRTLPQQAKKLHMSGARQAAPAPPPVRPP

Query:  YVWP
        Y WP
Subjt:  YVWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTACATAACCACATTTTTGTGTTCGTCCTCTTCATCATCATGCCGTTGCTCTCTTCAAATTTGCCATCAAATTTTGCTACACACTATATTCCCCCATCTCTTCT
GTCGCCGCCGTCAATGCCACCTACCACTAAACCTATAGTCCCTTATCACCCATTTATAATCCCTCCTCCATTTAAGAAAACTTCTAAACACACATGGTCGCCATCGTCGC
GGCCGCAAAAAGAATTGGGAAGGCCAATAGTTCCTTACTATCCCTATAAATTTCTACCACCTCCATATAGAAAACATGCCCATCCTCCTCCGGGCTACCATGTCTTTCCC
CCACGAACCTTACCGCAGCAAGCCAAAAAGCTTCACATGTCTGGGGCAAGGCAGGCAGCGCCTGCACCACCGCCAGTAAGGCCGCCATATGTGTGGCCGCCAAAATGGAT
CAGGCGTAATTCTACCCCACCTCCTTTCTAA
mRNA sequenceShow/hide mRNA sequence
GTCCTTAAACTTGGGTAAGTTATAAAGCATATGCTAGGTCTCCCCTTTTCTTTATAAGCTTTCAATTTTCAAAGAGATCATATATCTAAACTCAAACTTTCTTCAATTGA
TCAAGAGAAGTTGAGAACAATAATGGAGTTACATAACCACATTTTTGTGTTCGTCCTCTTCATCATCATGCCGTTGCTCTCTTCAAATTTGCCATCAAATTTTGCTACAC
ACTATATTCCCCCATCTCTTCTGTCGCCGCCGTCAATGCCACCTACCACTAAACCTATAGTCCCTTATCACCCATTTATAATCCCTCCTCCATTTAAGAAAACTTCTAAA
CACACATGGTCGCCATCGTCGCGGCCGCAAAAAGAATTGGGAAGGCCAATAGTTCCTTACTATCCCTATAAATTTCTACCACCTCCATATAGAAAACATGCCCATCCTCC
TCCGGGCTACCATGTCTTTCCCCCACGAACCTTACCGCAGCAAGCCAAAAAGCTTCACATGTCTGGGGCAAGGCAGGCAGCGCCTGCACCACCGCCAGTAAGGCCGCCAT
ATGTGTGGCCGCCAAAATGGATCAGGCGTAATTCTACCCCACCTCCTTTCTAATACTATGTTTATATATATATATATATATATGTGAGGCTTTTATTATTGTGGTTGAAT
TTCACCGAGGAATAAATATCTAATGTACAACATTTCTTTTAC
Protein sequenceShow/hide protein sequence
MELHNHIFVFVLFIIMPLLSSNLPSNFATHYIPPSLLSPPSMPPTTKPIVPYHPFIIPPPFKKTSKHTWSPSSRPQKELGRPIVPYYPYKFLPPPYRKHAHPPPGYHVFP
PRTLPQQAKKLHMSGARQAAPAPPPVRPPYVWPPKWIRRNSTPPPF