CuGenDBv2

Gene ID	IVF0003236
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic
Genome location	chr12:16737789..16738157
RNA-Seq Expression	IVF0003236
Synteny	IVF0003236
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0022900 - electron transport chain (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR006137 - NADH:ubiquinone oxidoreductase-like, 20kDa subunit

Homology

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GenBank top hits

e value

%identity

Alignment

QCY72846.1 NdhK [Cucumis hystrix]

1.46e-77

94.26

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQEENRCFTTNHKFHVGPST+TGNYDQGLLYQPSSTS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        EIIPP+TFFKYKSAVSSYELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

QHB75967.1 NADH dehydrogenase subunit K [Cucumis melo subsp. melo]

3.67e-77

93.44

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQE+NRCFTTNHKFHVGPST+TGNYDQGLLYQPSSTS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        EIIPP+TFFKYKSAVSSYELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

YP_004841787.1 NADH-plastoquinone oxidoreductase subunit K [Cucumis melo subsp. melo]

2.23e-78

95.08

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        EIIPP+TFFKYKSAVSSYELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

YP_009325993.1 NADH dehydrogenase subunit K [Citrullus lanatus]

1.28e-77

94.26

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQEENRCFTTNHKFHVGPST+TGNYDQGLLYQPSSTS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        EIIPP+TFFKYKSAVSSYELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

YP_009753878.1 NADH dehydrogenase subunit K [Trichosanthes lobata]

3.67e-77

93.44

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQEENRCFTTNHKFHVGPST+TGNYDQGLLYQPSSTS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        EIIPP+TFFKYKS+VSSYELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU13 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

9.1e-60

95.08

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        EIIPP+TFFKYKSAVSSYELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

A0A249RY14 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

9.1e-60

95.08

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        EIIPP+TFFKYKSAVSSYELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

A0A249RZ00 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

9.1e-60

95.08

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        EIIPP+TFFKYKSAVSSYELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

A0A249RZA1 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

9.1e-60

95.08

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        EIIPP+TFFKYKSAVSSYELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

A0A286NG00 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

9.1e-60

95.08

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        EIIPP+TFFKYKSAVSSYELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

SwissProt top hits

e value

%identity

Alignment

B0Z4L3 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

4.6e-53

84.43

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ +IDAITKL KKISREIYEDRI+SQEENRCFTTNHKFHVGPS +TGNYD GLLYQ  STS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        E I  +TFFKYKS+VS++ELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

B0Z4U7 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

4.6e-53

84.43

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ +IDAITKL KKISREIYEDRI+SQEENRCFTTNHKFHVGPS +TGNYD GLLYQ  STS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        E I  +TFFKYKS+VS++ELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

Q1KXV5 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

4.6e-53

84.43

Show/hide

Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ +IDAITKL KKISREIY DRI SQ ENRCFTTNHKF VG S +TGNYDQG LYQP STS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        E IPP+TFFKYKS+VSS+ELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

Q49KZ4 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

1.9e-54

86.07

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKI+REIYE+RI+SQEENRCFTTNHKFHVG S +TGNYDQGLLYQ  STS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        E IPP+TFFKYKS+VSS+ELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

Q4VZH1 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

7.9e-61

93.44

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQEENRCFTTNHKFHVGPST+TGNYDQ LLYQPSSTS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        EIIPP+TFFKYKSAVSSYELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

Arabidopsis top hits

e value

%identity

Alignment

AT5G11770.1 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial

3.6e-08

45.45

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Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISR
        MG+C   GG +   SYS VRG D+++PVD+Y  GCPP  + ++  + +L KKI+R
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISR

ATCG00430.1 photosystem II reaction center protein G

7.1e-49

79.51

Show/hide

Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKI+REIY+DRI+ Q+ NRCFTTNHKF V  S + GNYDQ LLY PSSTS
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTS

Query:  EIIPPKTFFKYKSAVSSYELVN
        E I  +TFFKYKS VSS+ELVN
Subjt:  EIIPPKTFFKYKSAVSSYELVN

Sequences

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CDS sequence

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ATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAGTTAATTCCTGTCGATGTGTATTTTTCGGGTTGTCCACC
TAAACCCAAGGTTGTTATAGATGCTATAACAAAACTTTGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAAAATCGGTGTTTTACTACCA
ATCACAAATTTCATGTTGGCCCAAGTACTAATACTGGAAATTACGATCAAGGATTACTCTATCAACCATCATCTACTTCAGAGATCATCCCTCCTAAAACTTTTTTCAAA
TACAAAAGTGCAGTCTCTTCCTACGAATTAGTAAATTAG

mRNA sequence

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Protein sequence

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MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHVGPSTNTGNYDQGLLYQPSSTSEIIPPKTFFK
YKSAVSSYELVN

IVF0003236 (gene) of Melon (IVF77) v1 genome