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IVF0003246 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003246
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr10:11758051..11758637
RNA-Seq ExpressionIVF0003246
SyntenyIVF0003246
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047158.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]7.86e-1050.56Show/hide
Query:  AKDGGSHTAAMKMPPETLTALDLQLEEEEKERLECGSDRDPASCGGKARGVRVWLARTRQPRSAKAVDRRRTGDARLLVDVERKGRGER
        AK+GGSHT AM+ P ETLTA +L+LEEEEK+     S +       +   +   LART++P SA+AVD RRT DARLL    R   GER
Subjt:  AKDGGSHTAAMKMPPETLTALDLQLEEEEKERLECGSDRDPASCGGKARGVRVWLARTRQPRSAKAVDRRRTGDARLLVDVERKGRGER
KAA0056718.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]9.33e-1650.94Show/hide
Query:  RNDVAKDGGSHTAAMKMPPETLTALDLQLEEEEKERLECGSDRDPASCGGKARGVRVWLARTRQPRSAKAVDRRRTGDARLL-VDVERKGRGERFSVVAA
        RND AKDGGSHTAAM+MP ETLT  DL+L+EEEK        +       +   +   LAR+++PRSA+AVDR+RT D RLL ++ + +GRG    VVA 
Subjt:  RNDVAKDGGSHTAAMKMPPETLTALDLQLEEEEKERLECGSDRDPASCGGKARGVRVWLARTRQPRSAKAVDRRRTGDARLL-VDVERKGRGERFSVVAA

Query:  NSIRRR
        NS+ RR
Subjt:  NSIRRR
TYK22297.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.03e-2250Show/hide
Query:  QAIAKTEVDDRWGSSTTAGRNDVAKDGGSHTAAMKMPPETLTALDLQLEEEEKERLECGSDRDPASCGGKARGVRVWLARTRQPRSAKAVDRRRTGDARL
        + + KTEV D WGSS  AGRNDVA+DGGSHT  M+MP E LT  DL LEEE+K+       +       +     + LARTR+PRSA+AVD R+T +ARL
Subjt:  QAIAKTEVDDRWGSSTTAGRNDVAKDGGSHTAAMKMPPETLTALDLQLEEEEKERLECGSDRDPASCGGKARGVRVWLARTRQPRSAKAVDRRRTGDARL

Query:  L-VDVERKGRGERFSVVAANSI
        L ++ + +GRG +  VV ANS+
Subjt:  L-VDVERKGRGERFSVVAANSI
TrEMBL top hitse value%identityAlignment
A0A5A7UNP7 NBS-LRR type resistance protein1.1e-1250.94Show/hide
Query:  RNDVAKDGGSHTAAMKMPPETLTALDLQLEEEEKERLECGSDRDPASCGGKARGVRVWLARTRQPRSAKAVDRRRTGDARLL-VDVERKGRGERFSVVAA
        RND AKDGGSHTAAM+MP ETLT  DL+L+EEEK        +       +   +   LAR+++PRSA+AVDR+RT D RLL ++ + +GRG    VVA 
Subjt:  RNDVAKDGGSHTAAMKMPPETLTALDLQLEEEEKERLECGSDRDPASCGGKARGVRVWLARTRQPRSAKAVDRRRTGDARLL-VDVERKGRGERFSVVAA

Query:  NSIRRR
        NS+ RR
Subjt:  NSIRRR
A0A5D3BPN0 NBS-LRR type resistance protein1.1e-0750.56Show/hide
Query:  AKDGGSHTAAMKMPPETLTALDLQLEEEEKERLECGSDRDPASCGGKARGVRVWLARTRQPRSAKAVDRRRTGDARLLVDVERKGRGER
        AK+GGSHT AM+ P ETLTA +L+LEEEEK+     S +       +   +   LART++P SA+AVD RRT DARLL    R   GER
Subjt:  AKDGGSHTAAMKMPPETLTALDLQLEEEEKERLECGSDRDPASCGGKARGVRVWLARTRQPRSAKAVDRRRTGDARLLVDVERKGRGER
A0A5D3DF34 NBS-LRR type resistance protein6.7e-1850Show/hide
Query:  QAIAKTEVDDRWGSSTTAGRNDVAKDGGSHTAAMKMPPETLTALDLQLEEEEKERLECGSDRDPASCGGKARGVRVWLARTRQPRSAKAVDRRRTGDARL
        + + KTEV D WGSS  AGRNDVA+DGGSHT  M+MP E LT  DL LEEE+K+       +       +     + LARTR+PRSA+AVD R+T +ARL
Subjt:  QAIAKTEVDDRWGSSTTAGRNDVAKDGGSHTAAMKMPPETLTALDLQLEEEEKERLECGSDRDPASCGGKARGVRVWLARTRQPRSAKAVDRRRTGDARL

Query:  L-VDVERKGRGERFSVVAANSIRR
        L ++ + +GRG +  VV ANS+ R
Subjt:  L-VDVERKGRGERFSVVAANSIRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACGGCTTACGTGGCTCGTTCTCGGCTCGCGGCTCGACTCGACTCAGTTCTCAGTCGCGGCTCGGCTCGGCTCGACTCAGTTCTCGGCTCGACTCGGATCAACTT
CGTGCAGGCGATCGCGAAAACGGAAGTCGACGATCGTTGGGGCTCGTCGACGACTGCTGGACGAAACGATGTGGCGAAAGATGGTGGCTCGCACACGGCTGCGATGAAAA
TGCCGCCAGAAACGCTGACGGCTCTGGATTTACAGCTCGAAGAAGAAGAAAAAGAAAGGTTGGAGTGTGGCAGTGATCGAGACCCGGCATCGTGCGGAGGAAAGGCAAGG
GGAGTTCGGGTCTGGCTTGCGAGGACTCGACAACCACGTTCGGCCAAAGCAGTCGATCGCAGGCGAACGGGAGATGCACGGCTACTGGTCGACGTTGAACGAAAAGGAAG
AGGGGAGAGGTTCAGTGTGGTTGCAGCGAACTCTATACGTCGGCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACGGCTTACGTGGCTCGTTCTCGGCTCGCGGCTCGACTCGACTCAGTTCTCAGTCGCGGCTCGGCTCGGCTCGACTCAGTTCTCGGCTCGACTCGGATCAACTT
CGTGCAGGCGATCGCGAAAACGGAAGTCGACGATCGTTGGGGCTCGTCGACGACTGCTGGACGAAACGATGTGGCGAAAGATGGTGGCTCGCACACGGCTGCGATGAAAA
TGCCGCCAGAAACGCTGACGGCTCTGGATTTACAGCTCGAAGAAGAAGAAAAAGAAAGGTTGGAGTGTGGCAGTGATCGAGACCCGGCATCGTGCGGAGGAAAGGCAAGG
GGAGTTCGGGTCTGGCTTGCGAGGACTCGACAACCACGTTCGGCCAAAGCAGTCGATCGCAGGCGAACGGGAGATGCACGGCTACTGGTCGACGTTGAACGAAAAGGAAG
AGGGGAGAGGTTCAGTGTGGTTGCAGCGAACTCTATACGTCGGCGTTGA
Protein sequenceShow/hide protein sequence
METAYVARSRLAARLDSVLSRGSARLDSVLGSTRINFVQAIAKTEVDDRWGSSTTAGRNDVAKDGGSHTAAMKMPPETLTALDLQLEEEEKERLECGSDRDPASCGGKAR
GVRVWLARTRQPRSAKAVDRRRTGDARLLVDVERKGRGERFSVVAANSIRRR