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IVF0003252 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003252
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationchr01:16964670..16965239
RNA-Seq ExpressionIVF0003252
SyntenyIVF0003252
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036627.1 hypothetical protein E6C27_scaffold191G001550 [Cucumis melo var. makuwa]2.49e-4370.34Show/hide
Query:  MFVCIGVLLISTILIDITKATTRTINYDAPQDAEIVCSPEDPRVFKLHYANDESGEYNSVDNCKTLKSNLNNDGGTQNVAPQSPSQNMAPQSPLQSMAPQ
        M V +GVLLIST LI+ITKAT+R +NY APQ  EIVCSPEDPRVFKLHYANDES E+N+VD+CKTL  NLN  G +Q+V PQSP  N+APQSP  ++APQ
Subjt:  MFVCIGVLLISTILIDITKATTRTINYDAPQDAEIVCSPEDPRVFKLHYANDESGEYNSVDNCKTLKSNLNNDGGTQNVAPQSPSQNMAPQSPLQSMAPQ

Query:  SSQEIKGDKNVGTPSPSM
        SSQE KG KNV TP P M
Subjt:  SSQEIKGDKNVGTPSPSM
KAE8646139.1 hypothetical protein Csa_016560, partial [Cucumis sativus]4.24e-3371.57Show/hide
Query:  MDISQKNMFVCIGVLLISTILIDITKATT-RTINYDA-PQDAEIVCSPEDPRVFKLHYANDESGEYNSVDNCKTLKSNLNNDGGTQNVAPQSP-SQNMAP
        M IS+KNM V +GVLLIST LI+ITKATT RT +Y    Q  EIVCSPEDPRVFKLHYANDES EYNSVD+CKTLKS  N +G + N+APQS  S NMAP
Subjt:  MDISQKNMFVCIGVLLISTILIDITKATT-RTINYDA-PQDAEIVCSPEDPRVFKLHYANDESGEYNSVDNCKTLKSNLNNDGGTQNVAPQSP-SQNMAP

Query:  QS
        QS
Subjt:  QS
TrEMBL top hitse value%identityAlignment
A0A0A0K4C8 Uncharacterized protein5.7e-3375.76Show/hide
Query:  MDISQKNMFVCIGVLLISTILIDITKATTRTINYDAPQDAEIVCSPEDPRVFKLHYANDESGEYNSVDNCKTLKSNLNNDGGTQNVAPQSPSQNMAPQS
        MDI++KNMFV +G+LLIST LI+ITKATTR++NY APQ  EIVCSPEDPRVF+LHYANDES EYN+VD+C TLKSNLN DG +QNV  QSPSQN+APQ+
Subjt:  MDISQKNMFVCIGVLLISTILIDITKATTRTINYDAPQDAEIVCSPEDPRVFKLHYANDESGEYNSVDNCKTLKSNLNNDGGTQNVAPQSPSQNMAPQS
A0A0A0K7P8 Uncharacterized protein4.4e-2571.57Show/hide
Query:  MDISQKNMFVCIGVLLISTILIDITKA-TTRTINY-DAPQDAEIVCSPEDPRVFKLHYANDESGEYNSVDNCKTLKSNLNNDGGTQNVAPQ-SPSQNMAP
        M IS+KNM V +GVLLIST LI+ITKA TTRT +Y    Q  EIVCSPEDPRVFKLHYANDES EYNSVD+CKTLKS  N +G + N+APQ S S NMAP
Subjt:  MDISQKNMFVCIGVLLISTILIDITKA-TTRTINY-DAPQDAEIVCSPEDPRVFKLHYANDESGEYNSVDNCKTLKSNLNNDGGTQNVAPQ-SPSQNMAP

Query:  QS
        QS
Subjt:  QS
A0A5D3BWB1 Uncharacterized protein7.5e-3370.34Show/hide
Query:  MFVCIGVLLISTILIDITKATTRTINYDAPQDAEIVCSPEDPRVFKLHYANDESGEYNSVDNCKTLKSNLNNDGGTQNVAPQSPSQNMAPQSPLQSMAPQ
        M V +GVLLIST LI+ITKAT+R +NY APQ  EIVCSPEDPRVFKLHYANDES E+N+VD+CKTL  NLN  G +Q+V PQSP  N+APQSP  ++APQ
Subjt:  MFVCIGVLLISTILIDITKATTRTINYDAPQDAEIVCSPEDPRVFKLHYANDESGEYNSVDNCKTLKSNLNNDGGTQNVAPQSPSQNMAPQSPLQSMAPQ

Query:  SSQEIKGDKNVGTPSPSM
        SSQE KG KNV TP P M
Subjt:  SSQEIKGDKNVGTPSPSM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATCTCCCAGAAAAACATGTTCGTATGTATTGGTGTTCTTCTTATTAGCACAATTCTAATTGATATTACAAAAGCAACGACAAGAACCATAAATTATGATGCTCC
TCAAGATGCGGAGATAGTATGTAGCCCAGAAGATCCAAGAGTTTTCAAACTACATTATGCAAATGATGAATCAGGTGAATATAATTCAGTTGATAATTGCAAAACTCTAA
AAAGTAACCTCAATAATGATGGCGGAACGCAAAATGTGGCTCCTCAATCACCATCGCAAAATATGGCTCCTCAATCACCATTACAAAGTATGGCTCCTCAAAGCTCACAG
GAAATTAAAGGAGATAAAAATGTTGGTACTCCTTCACCATCTATGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATTGAATTTATTTCCTTTCAATTAAAACAAACCCATCCTAAAAAAGGGTTGTGAGAAGAGACTTAATCTAATATAAATATTTACTTTTGAAAACTTTTGGTATACCAAAC
CAAAAGTGTATTATCTGTCCGGAAAACTATCAATTTTCAGGTTAAGAATTTTATCTTATCTACTTTTTTCTCATTAGATATGGATATCTCCCAGAAAAACATGTTCGTAT
GTATTGGTGTTCTTCTTATTAGCACAATTCTAATTGATATTACAAAAGCAACGACAAGAACCATAAATTATGATGCTCCTCAAGATGCGGAGATAGTATGTAGCCCAGAA
GATCCAAGAGTTTTCAAACTACATTATGCAAATGATGAATCAGGTGAATATAATTCAGTTGATAATTGCAAAACTCTAAAAAGTAACCTCAATAATGATGGCGGAACGCA
AAATGTGGCTCCTCAATCACCATCGCAAAATATGGCTCCTCAATCACCATTACAAAGTATGGCTCCTCAAAGCTCACAGGAAATTAAAGGAGATAAAAATGTTGGTACTC
CTTCACCATCTATGAATTAA
Protein sequenceShow/hide protein sequence
MDISQKNMFVCIGVLLISTILIDITKATTRTINYDAPQDAEIVCSPEDPRVFKLHYANDESGEYNSVDNCKTLKSNLNNDGGTQNVAPQSPSQNMAPQSPLQSMAPQSSQ
EIKGDKNVGTPSPSMN