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IVF0003253 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003253
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr06:16025873..16026226
RNA-Seq ExpressionIVF0003253
SyntenyIVF0003253
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037684.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.52e-1258.46Show/hide
Query:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT
        M+KNLV++SQL  VGNFVVF PN VKVY +F V+G  L+E +RM  IYV+ AE AYV   R  +T
Subjt:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT

KAA0045163.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]2.67e-1155.38Show/hide
Query:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT
        M+KNLV +SQL   GNFVVF P  VKVY +  V+G  LME Q M SIYV+LAE  Y+   R  +T
Subjt:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT

KAA0046986.1 Integrase, catalytic core [Cucumis melo var. makuwa]5.78e-1260Show/hide
Query:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT
        M+KNLVSVSQL   GNFVVF P+ VKVY +  V+G  LME +RM SIYV+ AE AYV   R   T
Subjt:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT

TYK22269.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.22e-1051.47Show/hide
Query:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKTNYI
        M+KNLVSVSQL    NF+VF  N VKVY +  V+G  LME +RM SIYV+ AE  Y+   +  +T Y+
Subjt:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKTNYI

XP_038896558.1 uncharacterized protein LOC120084811 [Benincasa hispida]6.02e-1252.17Show/hide
Query:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKTNYID
        M+KN VSVSQL+ VG FVVF P  VKVY +  V+G  LME +R+ SIYV+ +E  YV   R  K+  +D
Subjt:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKTNYID

TrEMBL top hitse value%identityAlignment
A0A0A0K4U2 Uncharacterized protein3.8e-1650Show/hide
Query:  KNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKTNYIDSSGEQCYT------------SRYVTDDRSFGEV
        +  V +SQL   G FVVF PN VKVYQD   +GKLLMERQ M SIY++LAE+AY+  QR   T  IDS+ EQC+T             +   D+RSF E 
Subjt:  KNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKTNYIDSSGEQCYT------------SRYVTDDRSFGEV

Query:  SKEKISQV
        SK++IS+V
Subjt:  SKEKISQV

A0A2N9IT58 Integrase catalytic domain-containing protein1.7e-0852.31Show/hide
Query:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT
        M+KNL+SV+QL L G++V+F P+ VKVY+D  ++   +ME QR+ SIYV+LAE+AYV   R  +T
Subjt:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT

A0A5A7T2J1 Integrase, catalytic core9.1e-1058.46Show/hide
Query:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT
        M+KNLV++SQL  VGNFVVF PN VKVY +F V+G  L+E +RM  IYV+ AE AYV   R  +T
Subjt:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT

A0A5A7TNQ2 UBN2_3 domain-containing protein1.7e-0855.38Show/hide
Query:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT
        M+KNLV +SQL   GNFVVF P  VKVY +  V+G  LME Q M SIYV+LAE  Y+   R  +T
Subjt:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT

A0A5A7TYD2 Integrase, catalytic core2.0e-0960Show/hide
Query:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT
        M+KNLVSVSQL   GNFVVF P+ VKVY +  V+G  LME +RM SIYV+ AE AYV   R   T
Subjt:  MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAGAATTTGGTATCAGTATCTCAATTGATGTTAGTAGGCAACTTTGTGGTGTTTAGACCTAATTGTGTTAAAGTATACCAAGATTTCAATGTCACTGGCAAGTT
GTTGATGGAAAGACAAAGGATGCATTCCATCTATGTCCTGCTAGCAGAAAATGCATACGTGGGTAATCAAAGACCCCCAAAGACAAACTATATTGATTCTAGTGGTGAAC
AATGCTATACATCAAGATATGTTACAGACGATAGGTCTTTTGGAGAAGTATCCAAAGAAAAGATAAGTCAAGTGTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAGAATTTGGTATCAGTATCTCAATTGATGTTAGTAGGCAACTTTGTGGTGTTTAGACCTAATTGTGTTAAAGTATACCAAGATTTCAATGTCACTGGCAAGTT
GTTGATGGAAAGACAAAGGATGCATTCCATCTATGTCCTGCTAGCAGAAAATGCATACGTGGGTAATCAAAGACCCCCAAAGACAAACTATATTGATTCTAGTGGTGAAC
AATGCTATACATCAAGATATGTTACAGACGATAGGTCTTTTGGAGAAGTATCCAAAGAAAAGATAAGTCAAGTGTCATAG
Protein sequenceShow/hide protein sequence
MQKNLVSVSQLMLVGNFVVFRPNCVKVYQDFNVTGKLLMERQRMHSIYVLLAENAYVGNQRPPKTNYIDSSGEQCYTSRYVTDDRSFGEVSKEKISQVS