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IVF0003256 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003256
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr10:10671160..10671345
RNA-Seq ExpressionIVF0003256
SyntenyIVF0003256
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032141.1 retrotransposon protein [Cucumis melo var. makuwa]1.46e-31100Show/hide
Query:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
        MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
Subjt:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
KAA0050190.1 retrotransposon protein [Cucumis melo var. makuwa]1.38e-2180.33Show/hide
Query:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
        M +GNEEFPSMYSQGIDM QEDVRASR SH S+GR+ SS SKRKRESQ++GEIEVIHMA+E
Subjt:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
KAA0060654.1 retrotransposon protein [Cucumis melo var. makuwa]2.34e-1981.97Show/hide
Query:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
        MPN NEEFPS+YSQGID+ QEDVRASRSS  SEGRV SSKSKRKR SQRE EI+VIHM LE
Subjt:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
KAA0066185.1 retrotransposon protein [Cucumis melo var. makuwa]3.24e-2078.69Show/hide
Query:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
        MPNGNEEFPSMY+QGIDM Q+DVR SR+S  SEGR  SS+ KRKR SQREG+IEVIHMALE
Subjt:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
TYK15225.1 retrotransposon protein [Cucumis melo var. makuwa]3.08e-2078.69Show/hide
Query:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
        MPNGNEEFPSMY+QGIDM Q+DVR SR+S  SEGR  SS+ KRKR SQREG+IEVIHMALE
Subjt:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
TrEMBL top hitse value%identityAlignment
A0A5A7SRG8 Retrotransposon protein2.6e-23100Show/hide
Query:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
        MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
Subjt:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
A0A5A7U4I8 Retrotransposon protein4.0e-1680.33Show/hide
Query:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
        M +GNEEFPSMYSQGIDM QEDVRASR SH S+GR+ SS SKRKRESQ++GEIEVIHMA+E
Subjt:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
A0A5A7V026 Retrotransposon protein4.4e-1581.97Show/hide
Query:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
        MPN NEEFPS+YSQGID+ QEDVRASRSS  SEGRV SSKSKRKR SQRE EI+VIHM LE
Subjt:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
A0A5A7VKA9 Retrotransposon protein1.2e-1578.69Show/hide
Query:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
        MPNGNEEFPSMY+QGIDM Q+DVR SR+S  SEGR  SS+ KRKR SQREG+IEVIHMALE
Subjt:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
A0A5D3CUK6 Retrotransposon protein1.2e-1578.69Show/hide
Query:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
        MPNGNEEFPSMY+QGIDM Q+DVR SR+S  SEGR  SS+ KRKR SQREG+IEVIHMALE
Subjt:  MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAATGGGAACGAGGAGTTTCCATCCATGTACAGCCAAGGGATTGACATGTTCCAGGAGGATGTACGCGCATCACGATCTTCTCATGCATCAGAGGGTAGGGTCGG
ATCGAGCAAATCAAAGAGGAAGAGGGAAAGCCAGCGGGAGGGCGAGATTGAAGTCATACATATGGCCCTCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGAATGGGAACGAGGAGTTTCCATCCATGTACAGCCAAGGGATTGACATGTTCCAGGAGGATGTACGCGCATCACGATCTTCTCATGCATCAGAGGGTAGGGTCGG
ATCGAGCAAATCAAAGAGGAAGAGGGAAAGCCAGCGGGAGGGCGAGATTGAAGTCATACATATGGCCCTCGAGTGA
Protein sequenceShow/hide protein sequence
MPNGNEEFPSMYSQGIDMFQEDVRASRSSHASEGRVGSSKSKRKRESQREGEIEVIHMALE