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IVF0003269 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003269
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionFlocculation protein FLO11-like
Genome locationchr04:10929024..10929959
RNA-Seq ExpressionIVF0003269
SyntenyIVF0003269
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058927.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]3.10e-5151.06Show/hide
Query:  KLTTSSKGKRYKGILTKHPYKKVRKSILS--------------------------GDNI-------------------LRAPSFQAFPQTALPSVAEDDD
        K  TSSKGKRYKGI TKHPYKKV KSI S                           DN                       PS QA P+TA P  A+DDD
Subjt:  KLTTSSKGKRYKGILTKHPYKKVRKSILS--------------------------GDNI-------------------LRAPSFQAFPQTALPSVAEDDD

Query:  D-FDDEDYVPGTEEKTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILLWPSM------------------------PPTKGQQVVSTKTGRRKVPPNV
        D  DDEDY PGT+EKTE E TSTSTE+ S S  KDP DH+STEE     +  S                         PPTKGQ+VVSTKTGR+KVPPNV
Subjt:  D-FDDEDYVPGTEEKTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILLWPSM------------------------PPTKGQQVVSTKTGRRKVPPNV

Query:  PSVPIDGVSFHSEEGAHKWNYVVKRRITDEANIAD
        PSVPIDGVSFHSEE AHKW YVVKR+I DEANI D
Subjt:  PSVPIDGVSFHSEEGAHKWNYVVKRRITDEANIAD

KAA0063048.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.76e-5449.18Show/hide
Query:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDN--------------------------------------------------------------
        M PSPPK  TS KGKR+K ILTKHPYKKVR++I +GD                                                               
Subjt:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDN--------------------------------------------------------------

Query:  -----------ILRAPSFQAFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILLWPSMPPTKGQQVVSTKT
                      APSFQA PQT+LPSVAEDDDD DDEDYVP TEEKT PE TSTS EDHS  H K PSDH+STEE                 V+STK 
Subjt:  -----------ILRAPSFQAFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILLWPSMPPTKGQQVVSTKT

Query:  GRRKVPPNVPSVPIDGVSFHSEEGAHKWNYVVKRRITDEANIAD
        GR+K+PPNVP VPIDGVSFHSEE AHKWNYVVKRRI DEANI D
Subjt:  GRRKVPPNVPSVPIDGVSFHSEEGAHKWNYVVKRRITDEANIAD

TYJ97654.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.45e-7979.31Show/hide
Query:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDNI--------------LRAPS-FQAFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEVTSTST
        MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDN               +  PS   AFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEVTSTST
Subjt:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDNI--------------LRAPS-FQAFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEVTSTST

Query:  EDHSVSHGKDPSDHKSTEEACGILLWPSMPPTKGQQVVSTKTGRRKVPPNVPSVPIDGVSFHSEEGAHKWNYVV
        EDHS    +   D   +  ACGILLWPSMPPTKGQQVVSTKTGRRKVPPNVPSVPIDGVSFHSEEGAHKWNYV+
Subjt:  EDHSVSHGKDPSDHKSTEEACGILLWPSMPPTKGQQVVSTKTGRRKVPPNVPSVPIDGVSFHSEEGAHKWNYVV

TYK16303.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.55e-5449.18Show/hide
Query:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDN--------------------------------------------------------------
        M PSPPK  TS KGKR+K ILTKHPYKKVR++I +GD                                                               
Subjt:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDN--------------------------------------------------------------

Query:  -----------ILRAPSFQAFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILLWPSMPPTKGQQVVSTKT
                      APSFQA PQT+LPSVAEDDDD DDEDYVP TEEKT PE TSTS EDHS  H K PSDH+STEE                 V+STK 
Subjt:  -----------ILRAPSFQAFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILLWPSMPPTKGQQVVSTKT

Query:  GRRKVPPNVPSVPIDGVSFHSEEGAHKWNYVVKRRITDEANIAD
        GR+K+PPNVP VPIDGVSFHSEE AHKWNYVVKRRI DEANI D
Subjt:  GRRKVPPNVPSVPIDGVSFHSEEGAHKWNYVVKRRITDEANIAD

XP_008441650.1 PREDICTED: uncharacterized protein LOC103485731 [Cucumis melo]6.23e-5252.94Show/hide
Query:  KLTTSSKGKRYKGILTKHPYKKVRKSILS--------------------------GDNILRAP-----SFQAFPQTALPSVAEDDDD-FDDEDYVPGTEE
        K  TSSKGKRYKGI TKHPYKKV KSI S                           DN++ +         A P+TA P  A+DDDD  DDEDY PGT+E
Subjt:  KLTTSSKGKRYKGILTKHPYKKVRKSILS--------------------------GDNILRAP-----SFQAFPQTALPSVAEDDDD-FDDEDYVPGTEE

Query:  KTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILLWPSM------------------------PPTKGQQVVSTKTGRRKVPPNVPSVPIDGVSFHSEE
        KTE E TSTSTE+ S S  KDP DH+STEE     +  S                         PPTKGQ+VVSTKTGR+KVPPNVPSVPIDGVSFHSEE
Subjt:  KTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILLWPSM------------------------PPTKGQQVVSTKTGRRKVPPNVPSVPIDGVSFHSEE

Query:  GAHKWNYVVKRRITDEANIAD
         AHKW YVVKR+I DEANI D
Subjt:  GAHKWNYVVKRRITDEANIAD

TrEMBL top hitse value%identityAlignment
A0A1S3B3W7 uncharacterized protein LOC1034857312.8e-4352.86Show/hide
Query:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSI--------------------------LSGDNILRA-----PSFQAFPQTALPSVA-EDDDDFDDEDY
        MD    K  TSSKGKRYKGI TKHPYKKV KSI                           S DN++ +         A P+TA P  A +DDDD DDEDY
Subjt:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSI--------------------------LSGDNILRA-----PSFQAFPQTALPSVA-EDDDDFDDEDY

Query:  VPGTEEKTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILL-----WPS-------------------MPPTKGQQVVSTKTGRRKVPPNVPSVPIDGV
         PGT+EKTE E TSTSTE+ S S  KDP DH+STEE     +      PS                    PPTKGQ+VVSTKTGR+KVPPNVPSVPIDGV
Subjt:  VPGTEEKTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILL-----WPS-------------------MPPTKGQQVVSTKTGRRKVPPNVPSVPIDGV

Query:  SFHSEEGAHKWNYVVKRRITDEANIAD
        SFHSEE AHKW YVVKR+I DEANI D
Subjt:  SFHSEEGAHKWNYVVKRRITDEANIAD

A0A5A7VKU4 Gag-pol polyprotein7.0e-4262.42Show/hide
Query:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDN-ILRAPSFQAFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEV---TSTSTEDHSVSHGKDP
        MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDN  + +P   +  + ++   +              +  + EP V   T     D S S  KD 
Subjt:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDN-ILRAPSFQAFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEV---TSTSTEDHSVSHGKDP

Query:  --SDHKSTEEACGILLWPSMPPTKGQQVVSTKTGRRKVPPNVPSVPIDGVSFHSEEGAHKWNYVV
           D   +  ACGILLWPSMPPTKGQQVVSTKTGRRKVPPNVPSVPIDGVSFHSEEGAHKWNYV+
Subjt:  --SDHKSTEEACGILLWPSMPPTKGQQVVSTKTGRRKVPPNVPSVPIDGVSFHSEEGAHKWNYVV

A0A5D3BF02 Gag-pol polyprotein5.3e-6679.31Show/hide
Query:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDN--------------ILRAPS-FQAFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEVTSTST
        MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDN               +  PS   AFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEVTSTST
Subjt:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDN--------------ILRAPS-FQAFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEVTSTST

Query:  EDHSVSHGKDPSDHKSTEEACGILLWPSMPPTKGQQVVSTKTGRRKVPPNVPSVPIDGVSFHSEEGAHKWNYVV
        EDHS    +   D   +  ACGILLWPSMPPTKGQQVVSTKTGRRKVPPNVPSVPIDGVSFHSEEGAHKWNYV+
Subjt:  EDHSVSHGKDPSDHKSTEEACGILLWPSMPPTKGQQVVSTKTGRRKVPPNVPSVPIDGVSFHSEEGAHKWNYVV

A0A5D3CWQ1 Gag-pol polyprotein4.2e-4749.18Show/hide
Query:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGD---------------------------------------------------------------
        M PSPPK  TS KGKR+K ILTKHPYKKVR++I +GD                                                               
Subjt:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGD---------------------------------------------------------------

Query:  ----------NILRAPSFQAFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILLWPSMPPTKGQQVVSTKT
                      APSFQA PQT+LPSVAEDDDD DDEDYVP TEEKT PE TSTS EDHS  H K PSDH+STEE                 V+STK 
Subjt:  ----------NILRAPSFQAFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILLWPSMPPTKGQQVVSTKT

Query:  GRRKVPPNVPSVPIDGVSFHSEEGAHKWNYVVKRRITDEANIAD
        GR+K+PPNVP VPIDGVSFHSEE AHKWNYVVKRRI DEANI D
Subjt:  GRRKVPPNVPSVPIDGVSFHSEEGAHKWNYVVKRRITDEANIAD

A0A5D3DJ92 Flocculation protein FLO11-like8.3e-4351.04Show/hide
Query:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSI--------------------------LSGDN-------------------ILRAPSFQAFPQTALPS
        MD    K  TSSKGKRYKGI TKHPYKKV KSI                           S DN                       PS QA P+TA P 
Subjt:  MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSI--------------------------LSGDN-------------------ILRAPSFQAFPQTALPS

Query:  VA-EDDDDFDDEDYVPGTEEKTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILL-----WPS-------------------MPPTKGQQVVSTKTGRR
         A +DDDD DDEDY PGT+EKTE E TSTSTE+ S S  KDP DH+STEE     +      PS                    PPTKGQ+VVSTKTGR+
Subjt:  VA-EDDDDFDDEDYVPGTEEKTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILL-----WPS-------------------MPPTKGQQVVSTKTGRR

Query:  KVPPNVPSVPIDGVSFHSEEGAHKWNYVVKRRITDEANIAD
        KVPPNVPSVPIDGVSFHSEE AHKW YVVKR+I DEANI D
Subjt:  KVPPNVPSVPIDGVSFHSEEGAHKWNYVVKRRITDEANIAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCCTCTCCTCCAAAGTTGACAACTTCCTCGAAGGGCAAACGGTACAAAGGAATTCTGACTAAGCATCCATATAAGAAAGTTCGCAAGTCAATTTTGTCTGGTGA
CAATATACTTCGCGCTCCGTCATTCCAGGCCTTTCCCCAAACTGCTCTTCCCTCTGTTGCGGAAGATGATGACGACTTTGATGATGAAGATTATGTTCCTGGAACGGAAG
AAAAGACAGAGCCTGAAGTCACGTCGACATCTACTGAAGACCATAGTGTATCTCATGGAAAGGACCCATCTGATCACAAATCAACTGAAGAGGCATGTGGCATCCTCCTC
TGGCCCTCGATGCCCCCTACTAAAGGACAACAAGTTGTCTCCACCAAGACTGGACGACGGAAGGTACCTCCTAATGTGCCATCCGTACCAATTGATGGTGTATCTTTTCA
CTCTGAGGAAGGGGCACATAAATGGAATTATGTGGTAAAGCGACGAATTACAGACGAAGCTAATATTGCTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCCTCTCCTCCAAAGTTGACAACTTCCTCGAAGGGCAAACGGTACAAAGGAATTCTGACTAAGCATCCATATAAGAAAGTTCGCAAGTCAATTTTGTCTGGTGA
CAATATACTTCGCGCTCCGTCATTCCAGGCCTTTCCCCAAACTGCTCTTCCCTCTGTTGCGGAAGATGATGACGACTTTGATGATGAAGATTATGTTCCTGGAACGGAAG
AAAAGACAGAGCCTGAAGTCACGTCGACATCTACTGAAGACCATAGTGTATCTCATGGAAAGGACCCATCTGATCACAAATCAACTGAAGAGGCATGTGGCATCCTCCTC
TGGCCCTCGATGCCCCCTACTAAAGGACAACAAGTTGTCTCCACCAAGACTGGACGACGGAAGGTACCTCCTAATGTGCCATCCGTACCAATTGATGGTGTATCTTTTCA
CTCTGAGGAAGGGGCACATAAATGGAATTATGTGGTAAAGCGACGAATTACAGACGAAGCTAATATTGCTGATTAA
Protein sequenceShow/hide protein sequence
MDPSPPKLTTSSKGKRYKGILTKHPYKKVRKSILSGDNILRAPSFQAFPQTALPSVAEDDDDFDDEDYVPGTEEKTEPEVTSTSTEDHSVSHGKDPSDHKSTEEACGILL
WPSMPPTKGQQVVSTKTGRRKVPPNVPSVPIDGVSFHSEEGAHKWNYVVKRRITDEANIAD