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IVF0003285 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003285
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranscription factor HBP-1b(C38)-like
Genome locationchr10:12971425..12971856
RNA-Seq ExpressionIVF0003285
SyntenyIVF0003285
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037416.1 hypothetical protein E6C27_scaffold278G001280 [Cucumis melo var. makuwa]1.48e-3266.32Show/hide
Query:  VLLTHKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLDVFFADTYRSV
        VL THKN+ +SEKIVG+GY DVF  V  YVGKTES EA PTRE+H VGNASP V+ PD +D V NTSLD +F DET GVEN S DV F ++Y SV
Subjt:  VLLTHKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLDVFFADTYRSV

KAA0055548.1 hypothetical protein E6C27_scaffold222G00210 [Cucumis melo var. makuwa]1.77e-3663.46Show/hide
Query:  HKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVG-NTSLDAVFCDETTGVENTSLDVFFADTYRSVGNDIFRRF
        HKNVG+SEKIVG+GYAD+F  VG++VGK+E  EAF TR++HGVGNAS  V+  D +DDV  NTS DA+F DE T +  +S DV F+D+YRS+GND FRRF
Subjt:  HKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVG-NTSLDAVFCDETTGVENTSLDVFFADTYRSVGNDIFRRF

Query:  CTSY
        C SY
Subjt:  CTSY

KAA0060536.1 hypothetical protein E6C27_scaffold22G003970 [Cucumis melo var. makuwa]2.10e-3063.54Show/hide
Query:  HKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLDVFFADTYRSVGNDIF
        HKNVG+SE IV +GY DVF  VG  V K+ES EAF TRE+HG+GNASP V+ PD ++   NTSLD VF +ETTGV  +S DV F D+YRSVGND F
Subjt:  HKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLDVFFADTYRSVGNDIF

KAA0063199.1 hypothetical protein E6C27_scaffold205G00060 [Cucumis melo var. makuwa]3.75e-2158.14Show/hide
Query:  GVLLTHKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLD
        GVL THK       IV +GYAD+F  VG YVGKTES+EAFPT E+HG+GNA P V+ PD  D V NTS + V+CD T GV N + D
Subjt:  GVLLTHKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLD

KAA0067048.1 hypothetical protein E6C27_scaffold38G00950 [Cucumis melo var. makuwa]5.63e-2964.13Show/hide
Query:  GVLLTHKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLDVFFADT
        GVL THKN+ +S+KIVGEGY DVF  VG YV K ES EAF T E+HGVGNASP     D +D VGNT  DA+F D+TTG+ NTS DVFFA++
Subjt:  GVLLTHKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLDVFFADT

TrEMBL top hitse value%identityAlignment
A0A5A7T5J5 Uncharacterized protein1.5e-2466.32Show/hide
Query:  VLLTHKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLDVFFADTYRSV
        VL THKN+ +SEKIVG+GY DVF  V  YVGKTES EA PTRE+H VGNASP V+ PD +D V NTSLD +F DET GVEN S DV F ++Y SV
Subjt:  VLLTHKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLDVFFADTYRSV

A0A5A7UKH4 Uncharacterized protein1.4e-2763.46Show/hide
Query:  HKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVG-NTSLDAVFCDETTGVENTSLDVFFADTYRSVGNDIFRRF
        HKNVG+SEKIVG+GYAD+F  VG++VGK+E  EAF TR++HGVGNAS  V+  D +DDV  NTS DA+F DE T +  +S DV F+D+YRS+GND FRRF
Subjt:  HKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVG-NTSLDAVFCDETTGVENTSLDVFFADTYRSVGNDIFRRF

Query:  CTSY
        C SY
Subjt:  CTSY

A0A5A7V224 Uncharacterized protein1.0e-2263.54Show/hide
Query:  HKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLDVFFADTYRSVGNDIF
        HKNVG+SE IV +GY DVF  VG  V K+ES EAF TRE+HG+GNASP V+ PD ++   NTSLD VF +ETTGV  +S DV F D+YRSVGND F
Subjt:  HKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLDVFFADTYRSVGNDIF

A0A5A7VC74 Uncharacterized protein5.0e-1758.14Show/hide
Query:  GVLLTHKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLD
        GVL TH       KIV +GYAD+F  VG YVGKTES+EAFPT E+HG+GNA P V+ PD  D V NTS + V+CD T GV N + D
Subjt:  GVLLTHKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLD

A0A5D3DSF9 Uncharacterized protein8.8e-2264.13Show/hide
Query:  GVLLTHKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLDVFFADT
        GVL THKN+ +S+KIVGEGY DVF  VG YV K ES EAF T E+HGVGNAS     PD +D VGNT  DA+F D+TTG+ NTS DVFFA++
Subjt:  GVLLTHKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLDVFFADT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGCCATGGCACCTCACTACAACACAAATTAGGAGAGAACACTACAAGAGATGGGGTACTCTTGACACACAAAAACGTCGGGAAAAGTGAAAAAATCGTCGGGGA
AGGATATGCCGACGTTTTTCTCGAAGTCGGGACCTACGTCGGAAAAACTGAGTCAAGAGAGGCATTCCCGACGCGTGAACGACACGGCGTCGGGAATGCTTCTCCCGGCG
TCATGTGTCCCGACACCCTCGACGACGTCGGGAATACCTCTCTCGACGCTGTTTTTTGCGATGAAACCACTGGCGTCGAAAATACCTCTCTCGACGTCTTTTTTGCCGAC
ACATATCGTAGTGTCGGGAATGATATATTCCGACGTTTTTGTACATCCTATTACCGACGTTTTGTTGCGTCGAGAATTCCTTTTTATATGTATTTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAGCCATGGCACCTCACTACAACACAAATTAGGAGAGAACACTACAAGAGATGGGGTACTCTTGACACACAAAAACGTCGGGAAAAGTGAAAAAATCGTCGGGGA
AGGATATGCCGACGTTTTTCTCGAAGTCGGGACCTACGTCGGAAAAACTGAGTCAAGAGAGGCATTCCCGACGCGTGAACGACACGGCGTCGGGAATGCTTCTCCCGGCG
TCATGTGTCCCGACACCCTCGACGACGTCGGGAATACCTCTCTCGACGCTGTTTTTTGCGATGAAACCACTGGCGTCGAAAATACCTCTCTCGACGTCTTTTTTGCCGAC
ACATATCGTAGTGTCGGGAATGATATATTCCGACGTTTTTGTACATCCTATTACCGACGTTTTGTTGCGTCGAGAATTCCTTTTTATATGTATTTTTTTTAA
Protein sequenceShow/hide protein sequence
MISHGTSLQHKLGENTTRDGVLLTHKNVGKSEKIVGEGYADVFLEVGTYVGKTESREAFPTRERHGVGNASPGVMCPDTLDDVGNTSLDAVFCDETTGVENTSLDVFFAD
TYRSVGNDIFRRFCTSYYRRFVASRIPFYMYFF