; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0003292 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003292
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description30S ribosomal protein S21
Genome locationchr12:23110201..23111904
RNA-Seq ExpressionIVF0003292
SyntenyIVF0003292
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21
IPR038380 - Ribosomal protein S21 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055302.1 Ribosomal_S21 domain-containing protein [Cucumis melo var. makuwa]3.91e-9477.42Show/hide
Query:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
        MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
Subjt:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSTTEKQPDKKTPESKNKD
        KRRRFFENSQAKRKRKAREAAKRNRKR                                                 RFRRPQSTTEKQPDKKTPESKNKD
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSTTEKQPDKKTPESKNKD

Query:  EEDDNWDFYQVDLPYSS
        EEDDNWDFYQVDLPYSS
Subjt:  EEDDNWDFYQVDLPYSS

TYJ99226.1 putative Ribosomal protein S21 family protein [Cucumis melo var. makuwa]3.91e-9477.42Show/hide
Query:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
        MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
Subjt:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSTTEKQPDKKTPESKNKD
        KRRRFFENSQAKRKRKAREAAKRNRKR                                                 RFRRPQSTTEKQPDKKTPESKNKD
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSTTEKQPDKKTPESKNKD

Query:  EEDDNWDFYQVDLPYSS
        EEDDNWDFYQVDLPYSS
Subjt:  EEDDNWDFYQVDLPYSS

XP_004152510.2 30S ribosomal protein S21, chloroplastic [Cucumis sativus]2.97e-9492.81Show/hide
Query:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
        MAAAATSSITNFFSFLSISKSSQIHHNSVSIN QSLP SK TRLFASRGNVASSSQEPKGV  RILNYN+LITVGENESEDQVVNRFR QVLRAGILQEC
Subjt:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYS
        KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQS T +QPD+KTPESKN+DEEDDNWDFYQVDLPYS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYS

XP_008439325.1 PREDICTED: uncharacterized protein LOC103484145 [Cucumis melo]5.22e-104100Show/hide
Query:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
        MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
Subjt:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYSS
        KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYSS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYSS

XP_038894121.1 30S ribosomal protein S21, chloroplastic-like [Benincasa hispida]1.38e-8384.52Show/hide
Query:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
        MAAAATSS+T FFS LSISKSSQIHHNSVSIN QSLPKSK  RLFA+RG+V  SSQEPKGV S +  YNVLITVGENESEDQ+VNRFR QVLRAGILQEC
Subjt:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYSS
        KRRRFFENSQAKRKRKAREAAKRNRKR FRRPQS  E+QP+KKTP+ KN+DEEDDNWDFYQVDLPY S
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYSS

TrEMBL top hitse value%identityAlignment
A0A0A0LWJ6 Uncharacterized protein4.9e-7292.81Show/hide
Query:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
        MAAAATSSITNFFSFLSISKSSQIHHNSVSIN QSLP SK TRLFASRGNVASSSQEPKGV  RILNYN+LITVGENESEDQVVNRFR QVLRAGILQEC
Subjt:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYS
        KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQS T +QPD+KTPESKN+DEEDDNWDFYQVDLPYS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYS

A0A1S3AZ70 uncharacterized protein LOC1034841451.9e-79100Show/hide
Query:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
        MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
Subjt:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYSS
        KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYSS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYSS

A0A5A7UHJ6 Ribosomal_S21 domain-containing protein1.7e-7277.42Show/hide
Query:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
        MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
Subjt:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSTTEKQPDKKTPESKNKD
        KRRRFFENSQAKRKRKAREAAKRNRKR                                                 RFRRPQSTTEKQPDKKTPESKNKD
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSTTEKQPDKKTPESKNKD

Query:  EEDDNWDFYQVDLPYSS
        EEDDNWDFYQVDLPYSS
Subjt:  EEDDNWDFYQVDLPYSS

A0A5D3BJF5 Putative Ribosomal protein S21 family protein1.7e-7277.42Show/hide
Query:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
        MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
Subjt:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSTTEKQPDKKTPESKNKD
        KRRRFFENSQAKRKRKAREAAKRNRKR                                                 RFRRPQSTTEKQPDKKTPESKNKD
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSTTEKQPDKKTPESKNKD

Query:  EEDDNWDFYQVDLPYSS
        EEDDNWDFYQVDLPYSS
Subjt:  EEDDNWDFYQVDLPYSS

E5GBW8 Structural constituent of ribosome1.9e-79100Show/hide
Query:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
        MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC
Subjt:  MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYSS
        KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYSS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYSS

SwissProt top hitse value%identityAlignment
P82024 30S ribosomal protein S21, chloroplastic6.5e-1336.22Show/hide
Query:  AATSSITNFFSFLSISKSS---------------QIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRIL---NYNVLITVGENESEDQVVN
        A+TSS+ NF S L  S +S                   NS+SI+ +    +   +     G++ +        S+ +     YNV + V +NE+E++++N
Subjt:  AATSSITNFFSFLSISKSS---------------QIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRIL---NYNVLITVGENESEDQVVN

Query:  RFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRR---FRRPQSTTEKQPDKKTPESKNKDEED-DNWDFYQVDLPY
        RFR +V+RAG++QECKRRR+FEN Q ++KRK REAAKRN +RR   FR P       P K+     +K E+D DNWD  +   P+
Subjt:  RFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRR---FRRPQSTTEKQPDKKTPESKNKDEED-DNWDFYQVDLPY

Q2JM43 30S ribosomal protein S217.2e-0446.43Show/hide
Query:  ITVGENESEDQVVNRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKR
        +T+GENE  +  + RF+ QV +AGIL++ +  R FE +  KRKRKA  A +RNR++
Subjt:  ITVGENESEDQVVNRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKR

Q7NHA1 30S ribosomal protein S21 21.9e-0448.15Show/hide
Query:  ITVGENESEDQVVNRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNR
        + +GENES +  + RF+ ++ +AGIL E KRR  +E   A+RKRKA  A KR R
Subjt:  ITVGENESEDQVVNRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNR

Q8DMS3 30S ribosomal protein S215.5e-0446.3Show/hide
Query:  ITVGENESEDQVVNRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNR
        + +GENES +  + RF+ ++ +AGIL E KRR  +E    +RKRK   A KRNR
Subjt:  ITVGENESEDQVVNRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNR

Q8RB59 30S ribosomal protein S213.2e-0447.27Show/hide
Query:  ITVGENESEDQVVNRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRK
        + VGENES D  + RFR Q  +AG+L E ++R  +E+   KRK+KA  A KR  K
Subjt:  ITVGENESEDQVVNRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRK

Arabidopsis top hitse value%identityAlignment
AT3G27160.1 Ribosomal protein S21 family protein4.0e-1837.02Show/hide
Query:  AATSSITNFFSFLSISKS-----------------SQIHHNSVSINFQSLPKSKQT--RLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVV
        AA+ S+T+F SF+S  KS                 SQ   N ++I   ++ ++  T   L +   +V   S            YNV + V +NESE+++V
Subjt:  AATSSITNFFSFLSISKS-----------------SQIHHNSVSINFQSLPKSKQT--RLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVV

Query:  NRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLP
        NRFR +V+R G++QECKRRR+FEN Q ++KR+ R+AAKRN+KRR +   +   ++      +SK KDEE+DNW+    D+P
Subjt:  NRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLP

AT5G63300.1 Ribosomal protein S21 family protein9.6e-1241.35Show/hide
Query:  YNVLITVGENESEDQVVNRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRRFR-RPQSTTEKQPDKKTPESKNKDEEDDNWDF--YQVDL
        YNV +   + ESE+Q+VN F+    RAG+LQE +RRRFFE+S  K+ RK +EAAK+ RKRR   +P+  +  +  K    +  +DE+DD+W+     +++
Subjt:  YNVLITVGENESEDQVVNRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRRFR-RPQSTTEKQPDKKTPESKNKDEEDDNWDF--YQVDL

Query:  PYSS
        PY++
Subjt:  PYSS

AT5G63300.2 Ribosomal protein S21 family protein2.6e-0955Show/hide
Query:  YNVLITVGENESEDQVVNRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKR
        YNV +   + ESE+Q+VN F+    RAG+LQE +RRRFFE+S  K+ RK +EAAK+ RKR
Subjt:  YNVLITVGENESEDQVVNRFRTQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCTGCAACTTCATCTATCACGAATTTCTTCTCCTTCCTCTCCATCTCGAAATCATCACAAATACACCATAACTCCGTCTCTATAAACTTCCAGTCTCTTCC
AAAGTCTAAACAGACCCGGTTGTTTGCCTCCAGGGGTAATGTTGCATCTTCTTCCCAAGAACCTAAGGGTGTTTCCTCACGCATTTTAAATTATAATGTTCTGATCACCG
TGGGTGAGAACGAGTCTGAAGACCAGGTGGTGAATCGGTTTAGGACACAGGTCTTGAGAGCAGGAATTTTGCAGGAGTGTAAGAGGAGAAGATTTTTCGAAAATAGCCAG
GCAAAGAGAAAGAGGAAAGCTAGGGAAGCTGCTAAGAGGAATCGCAAGAGAAGGTTTAGGAGGCCTCAGTCAACAACTGAGAAGCAGCCAGACAAGAAAACCCCTGAGAG
TAAGAATAAAGATGAGGAAGATGACAACTGGGACTTTTACCAAGTAGACCTTCCATACAGTTCATAA
mRNA sequenceShow/hide mRNA sequence
CTCAAAACCTACGTTTCACCAACGCGACTTAGGCCCGGCCACCGGTCCGAAGAGGAAGTGGAAGACGGACCACCGGTGAGTCGCCATGGCCGCCGCTGCAACTTCATCTA
TCACGAATTTCTTCTCCTTCCTCTCCATCTCGAAATCATCACAAATACACCATAACTCCGTCTCTATAAACTTCCAGTCTCTTCCAAAGTCTAAACAGACCCGGTTGTTT
GCCTCCAGGGGTAATGTTGCATCTTCTTCCCAAGAACCTAAGGGTGTTTCCTCACGCATTTTAAATTATAATGTTCTGATCACCGTGGGTGAGAACGAGTCTGAAGACCA
GGTGGTGAATCGGTTTAGGACACAGGTCTTGAGAGCAGGAATTTTGCAGGAGTGTAAGAGGAGAAGATTTTTCGAAAATAGCCAGGCAAAGAGAAAGAGGAAAGCTAGGG
AAGCTGCTAAGAGGAATCGCAAGAGAAGGTTTAGGAGGCCTCAGTCAACAACTGAGAAGCAGCCAGACAAGAAAACCCCTGAGAGTAAGAATAAAGATGAGGAAGATGAC
AACTGGGACTTTTACCAAGTAGACCTTCCATACAGTTCATAAAGGTCGCTCTGCCTTGAAAGAATGAAACTAATATCTGTAATGGATGAGAGGAATTATTAGATGTTTAG
TGTATTTTACTTGATATTATTTAGTTTAGTTGGTAATTTAGAATTAGTTAGTAAATTGTCAAAGCTATAAATAGCTACTTTAGGTTGTAATGTGAAGCTTTTTAAATACC
GTTTGGAAAATAGAATTGTTCTTAGAGAACTCTCTTTG
Protein sequenceShow/hide protein sequence
MAAAATSSITNFFSFLSISKSSQIHHNSVSINFQSLPKSKQTRLFASRGNVASSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRTQVLRAGILQECKRRRFFENSQ
AKRKRKAREAAKRNRKRRFRRPQSTTEKQPDKKTPESKNKDEEDDNWDFYQVDLPYSS