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IVF0003327 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003327
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:5841898..5842065
RNA-Seq ExpressionIVF0003327
SyntenyIVF0003327
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052287.1 retrotransposon protein [Cucumis melo var. makuwa]1.09e-30100Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
        MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]5.13e-2987.27Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
        MTYC+D+DDVDEGDS YATTTASEDIHYIETTN+WSQW ++LAESMFTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]8.81e-2889.09Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
        MTYCEDVDD DEGDSTYATTTASEDI YIETTN+WSQW +DLAESMFTDWQLRN+
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
TYK07648.1 retrotransposon protein [Cucumis melo var. makuwa]4.89e-2790.91Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
        MTYCEDVDD+DEGDSTYATTTASEDIHYIETTN+WSQW +DLAE MFTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
TYK11987.1 retrotransposon protein [Cucumis melo var. makuwa]1.25e-2789.09Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
        MTYC DVDD DEGDSTYATTTASEDI YIETTN+WSQW NDLAESMFT+WQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7U6D8 Retrotransposon protein4.9e-2190.91Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
        MTYCEDVDD+DEGDSTYATTTASEDIHYIETTN+WSQW +DLAE MFTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
A0A5A7UCT7 Retrotransposon protein3.6e-24100Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
        MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
A0A5A7VK86 Retrotransposon protein1.4e-2089.09Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
        MTYCEDVDDVDEGDSTYATTTASEDIHYIETTN+WSQW ++L ESMFTDWQL NA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
A0A5D3BDZ0 Retrotransposon protein1.4e-2087.27Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
        MTYC+D+DDVDEGDS YATTTASEDIHYIETTN+WSQW ++LAESMFTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
A0A5D3C8Z4 Retrotransposon protein4.9e-2190.91Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
        MTYCEDVDD+DEGDSTYATTTASEDIHYIETTN+WSQW +DLAE MFTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGAGGACGTTGACGACGTGGACGAGGGGGACTCCACGTACGCGACAACCACCGCTTCAGAAGACATTCACTACATTGAGACAACAAACAAGTGGTCTCA
GTGGCCCAACGACCTAGCCGAATCGATGTTCACCGATTGGCAGTTGCGTAATGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGAGGACGTTGACGACGTGGACGAGGGGGACTCCACGTACGCGACAACCACCGCTTCAGAAGACATTCACTACATTGAGACAACAAACAAGTGGTCTCA
GTGGCCCAACGACCTAGCCGAATCGATGTTCACCGATTGGCAGTTGCGTAATGCTTAG
Protein sequenceShow/hide protein sequence
MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNKWSQWPNDLAESMFTDWQLRNA