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IVF0003345 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003345
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranscription factor like
Genome locationchr05:2448303..2448488
RNA-Seq ExpressionIVF0003345
SyntenyIVF0003345
Gene Ontology termsGO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589264.1 Transcription factor TCP10, partial [Cucurbita argyrosperma subsp. sororia]6.99e-1668.33Show/hide
Query:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        MK++   EIV VQ  HI+ STARK   SKVFTAKGP D  V+L AHTAIRFYDVQD+LGY
Subjt:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

XP_022930891.1 transcription factor TCP10-like [Cucurbita moschata]1.91e-1566.67Show/hide
Query:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        MK++   EIV VQ  HI+ STARK   SKVFT+KGP D  V+L AHTAIRFYDVQD+LGY
Subjt:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

XP_022989259.1 transcription factor TCP10-like [Cucurbita maxima]1.83e-1670Show/hide
Query:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        MKT+   EIV VQ  HI+ STARK   SKVFTAKGP D  V+L AHTAIRFYDVQD+LGY
Subjt:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

XP_023529225.1 transcription factor TCP10-like [Cucurbita pepo subsp. pepo]6.99e-1668.33Show/hide
Query:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        MK++   EIV VQ  HI+ STARK   SKVFTAKGP D  V+L AHTAIRFYDVQD+LGY
Subjt:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

XP_038877605.1 transcription factor TCP10-like [Benincasa hispida]6.16e-1873.33Show/hide
Query:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        MKT+T  EIV VQ  HIL ST RK   SKVFTAKGP D  V+L AHTAIRFYDVQDRLGY
Subjt:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

TrEMBL top hitse value%identityAlignment
A0A4D6FEA3 TCP121.3e-1165Show/hide
Query:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        MK  T +EIV V+  HIL ST+RK   SKV+TAKGP D  V+L AHTAI+FYD+QDRLGY
Subjt:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

A0A6J1ES58 transcription factor TCP10-like6.0e-1266.67Show/hide
Query:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        MK++   EIV VQ  HI+ STARK   SKVFT+KGP D  V+L AHTAIRFYDVQD+LGY
Subjt:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

A0A6J1JNV1 transcription factor TCP10-like9.3e-1370Show/hide
Query:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        MKT+   EIV VQ  HI+ STARK   SKVFTAKGP D  V+L AHTAIRFYDVQD+LGY
Subjt:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

A0A7J0DYU1 TCP domain protein 101.3e-1165Show/hide
Query:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        MK +   EIV VQ  HIL ST+RK   SKVFTAKGP D  +++ AHTAI+FYDVQDRLGY
Subjt:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

A0A803NBK0 Uncharacterized protein1.0e-1165Show/hide
Query:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        +K+ T  EIV VQ  HI+ +T RK   SKVFTAKGP D  V+L AHTAI+FYDVQDRLGY
Subjt:  MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

SwissProt top hitse value%identityAlignment
A2WM14 Transcription factor PCF52.6e-1267.92Show/hide
Query:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        EIV VQ  HI+ ST RK   SKV TA+GP D  V+L AHTAI+FYDVQDRLGY
Subjt:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

O82277 Transcription factor TCP108.9e-1367.92Show/hide
Query:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        EIV VQ  HI+ +T RK   SKVFT+KGP D  V+L AHTAI+FYDVQDRLGY
Subjt:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

Q8LPR5 Transcription factor TCP45.8e-1267.92Show/hide
Query:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        EIV VQ  HI+ ST RK   SKV TAKGP D  V+L AHTAI+FYDVQDRLG+
Subjt:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

Q8LT07 Transcription factor PCF52.6e-1267.92Show/hide
Query:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        EIV VQ  HI+ ST RK   SKV TA+GP D  V+L AHTAI+FYDVQDRLGY
Subjt:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

Q9MAH8 Transcription factor TCP38.4e-1166.04Show/hide
Query:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        EIV VQ  HI+ ST RK   SKV TAKGP D  V+L A TAI+FYDVQDRLG+
Subjt:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

Arabidopsis top hitse value%identityAlignment
AT1G53230.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 35.9e-1266.04Show/hide
Query:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        EIV VQ  HI+ ST RK   SKV TAKGP D  V+L A TAI+FYDVQDRLG+
Subjt:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

AT2G31070.1 TCP domain protein 106.3e-1467.92Show/hide
Query:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        EIV VQ  HI+ +T RK   SKVFT+KGP D  V+L AHTAI+FYDVQDRLGY
Subjt:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

AT3G15030.1 TCP family transcription factor 44.1e-1367.92Show/hide
Query:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        EIV VQ  HI+ ST RK   SKV TAKGP D  V+L AHTAI+FYDVQDRLG+
Subjt:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

AT3G15030.2 TCP family transcription factor 44.1e-1367.92Show/hide
Query:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        EIV VQ  HI+ ST RK   SKV TAKGP D  V+L AHTAI+FYDVQDRLG+
Subjt:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY

AT3G15030.3 TCP family transcription factor 44.1e-1367.92Show/hide
Query:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY
        EIV VQ  HI+ ST RK   SKV TAKGP D  V+L AHTAI+FYDVQDRLG+
Subjt:  EIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACCAACACCTACGACGAGATTGTTTTAGTTCAAGACAGCCATATCCTCTATTCCACTGCCAGAAAATACCATTGCAGTAAGGTCTTCACTGCCAAAGGCCCTCT
CGACCACGATGTCAAATTGTTAGCTCACACTGCCATCCGATTCTATGATGTGCAAGATCGATTGGGTTACAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGACCAACACCTACGACGAGATTGTTTTAGTTCAAGACAGCCATATCCTCTATTCCACTGCCAGAAAATACCATTGCAGTAAGGTCTTCACTGCCAAAGGCCCTCT
CGACCACGATGTCAAATTGTTAGCTCACACTGCCATCCGATTCTATGATGTGCAAGATCGATTGGGTTACAAATAG
Protein sequenceShow/hide protein sequence
MKTNTYDEIVLVQDSHILYSTARKYHCSKVFTAKGPLDHDVKLLAHTAIRFYDVQDRLGYK