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IVF0003346 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003346
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr03:1320554..1320814
RNA-Seq ExpressionIVF0003346
SyntenyIVF0003346
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025769.1 hypothetical protein E6C27_scaffold34G00120 [Cucumis melo var. makuwa]2.16e-2667.06Show/hide
Query:  MEKCIFNMIAQRLVDS----------KYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVED
        ME+ IFN IAQRL D           KYGIERMKALGATPFKG V   EVEAWL+LIEKCF V+ C +DRKVELATFLL+K  ED
Subjt:  MEKCIFNMIAQRLVDS----------KYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVED

KAA0035024.1 hypothetical protein E6C27_scaffold57G00740 [Cucumis melo var. makuwa]9.52e-2055.42Show/hide
Query:  EKCIFNMIAQRLV--------DSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW
        E+ +F   +QRLV        + ++GIER+KALGAT F+G   PA VE WLSLIEK FGV+ CS +R V+LAT LLQ  VEDW
Subjt:  EKCIFNMIAQRLV--------DSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW

XP_038877203.1 uncharacterized protein LOC120069501 [Benincasa hispida]8.72e-2066.13Show/hide
Query:  DSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW
        + KYGIER+KALGAT F+G   PA+ E W++ IEKCF V+ C K RKV LATFLLQK+VEDW
Subjt:  DSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW

XP_038882393.1 uncharacterized protein LOC120073661 [Benincasa hispida]7.49e-2155.81Show/hide
Query:  MEKCIFNMIAQRLVDS----------KYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW
        +E  +F+ I QRLV S          KYGIER KALGA  F+G   PAEVE WL ++EKCF V+ C +DRK+ LATFLLQKE E W
Subjt:  MEKCIFNMIAQRLVDS----------KYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW

XP_038896416.1 uncharacterized protein LOC120084680 [Benincasa hispida]2.98e-1955.81Show/hide
Query:  MEKCIFNMIAQRLVDS----------KYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW
        ME  +F+ I QRL  S          K+GIER+KALGAT F G   P + E WL LIEKCF V+ C +D KVELATFLLQK VE W
Subjt:  MEKCIFNMIAQRLVDS----------KYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein1.1e-1553.49Show/hide
Query:  MEKCIFNMIAQRLV----------DSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW
        +E+ + + +AQRL+          + KYGIER+KALGAT F G   P + E WL+LIEKCF V  CS+DRKVELA FLLQ   EDW
Subjt:  MEKCIFNMIAQRLV----------DSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW

A0A5A7SKG0 Uncharacterized protein3.4e-2067.06Show/hide
Query:  MEKCIFNMIAQRLVD----------SKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVED
        ME+ IFN IAQRL D           KYGIERMKALGATPFKG V   EVEAWL+LIEKCF V+ C +DRKVELATFLL+K  ED
Subjt:  MEKCIFNMIAQRLVD----------SKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVED

A0A5A7TBS0 CCHC-type domain-containing protein3.3e-1565.67Show/hide
Query:  AQRLVDSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW
        AQ     KYGIER+KALGAT F G   P +VEAWL+LIEKCF V  C +DRKVELA FLLQ   EDW
Subjt:  AQRLVDSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW

A0A5A7UZM6 Gag protease polyprotein-like protein2.5e-1567.74Show/hide
Query:  DSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW
        + KYGIER+KALGAT F G   PA+ EAWL+LIEKCF V  C +DRKVELA FLLQ   EDW
Subjt:  DSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW

A0A5D3CTK6 CCHC-type domain-containing protein3.3e-1565.67Show/hide
Query:  AQRLVDSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW
        AQ     KYGIER+KALGAT F G   P +VEAWL+LIEKCF V  C +DRKVELA FLLQ   EDW
Subjt:  AQRLVDSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGTGTATCTTTAATATGATAGCTCAGAGGTTGGTTGACAGTAAATATGGCATTGAGAGGATGAAAGCTTTAGGTGCCACTCCGTTTAAGGGGATTGTAGTTCC
TGCTGAAGTAGAGGCATGGTTGTCGTTGATAGAGAAATGTTTTGGAGTTATATGTTGTTCGAAAGACAGAAAAGTGGAACTGGCTACATTCCTGCTTCAAAAAGAAGTGG
AGGATTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGTGTATCTTTAATATGATAGCTCAGAGGTTGGTTGACAGTAAATATGGCATTGAGAGGATGAAAGCTTTAGGTGCCACTCCGTTTAAGGGGATTGTAGTTCC
TGCTGAAGTAGAGGCATGGTTGTCGTTGATAGAGAAATGTTTTGGAGTTATATGTTGTTCGAAAGACAGAAAAGTGGAACTGGCTACATTCCTGCTTCAAAAAGAAGTGG
AGGATTGGTGA
Protein sequenceShow/hide protein sequence
MEKCIFNMIAQRLVDSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW