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IVF0003373 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003373
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr03:1806807..1807043
RNA-Seq ExpressionIVF0003373
SyntenyIVF0003373
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056591.1 retrotransposon protein [Cucumis melo var. makuwa]2.84e-44100Show/hide
Query:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
        MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
Subjt:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
KAA0058838.1 retrotransposon protein [Cucumis melo var. makuwa]2.52e-2667.95Show/hide
Query:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
        + VIRDA+ECANDQLR IA+W KLAMQDED TR +VIRQL+ IPELS LDRARC++ +   L +MKAFL + E+MKMD
Subjt:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]1.28e-1750Show/hide
Query:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
        ME+IR+ ME +ND+L+AI +W  +  QD      +V+RQLQ IPELSR DR R MQ +   +D+MKAFL++L+++K+D
Subjt:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
KAA0066582.1 retrotransposon protein [Cucumis melo var. makuwa]1.48e-2164Show/hide
Query:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDM
        ++VIR  M+C ND LRAI DW KLA Q+ED TR +VIRQLQ IPELSRLDR R ++ +AG L  MKAFL+L  DM
Subjt:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDM
TYK15318.1 retrotransposon protein [Cucumis melo var. makuwa]3.93e-2365.33Show/hide
Query:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDM
        ++VIRD M+C ND LRAI DW KLA Q+ED TR +VIRQLQ IPELSRLDR R ++ +AG L  MKAFL+L  DM
Subjt:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDM
TrEMBL top hitse value%identityAlignment
A0A5A7URM1 Retrotransposon protein7.0e-1351.28Show/hide
Query:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
        +++I  AM+CANDQLR I +W+ +A+Q+E T   +V+ QL AIPELSRLDR    + +   LD+M+ FL +LED KMD
Subjt:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
A0A5A7USV9 Retrotransposon protein6.5e-35100Show/hide
Query:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
        MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
Subjt:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
A0A5A7UUF7 Retrotransposon protein1.0e-1967.95Show/hide
Query:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
        + VIRDA+ECANDQLR IA+W KLAMQDED TR +VIRQL+ IPELS LDRARC++ +   L +MKAFL + E+MKMD
Subjt:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD
A0A5A7VE05 Retrotransposon protein8.8e-1664Show/hide
Query:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDM
        ++VIR  M+C ND LRAI DW KLA Q+ED TR +VIRQLQ IPELSRLDR R ++ +AG L  MKAFL+L  DM
Subjt:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDM
A0A5D3CVP7 Retrotransposon protein1.4e-1665.33Show/hide
Query:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDM
        ++VIRD M+C ND LRAI DW KLA Q+ED TR +VIRQLQ IPELSRLDR R ++ +AG L  MKAFL+L  DM
Subjt:  MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTCATTCGCGATGCAATGGAATGTGCGAATGACCAGCTAAGGGCCATTGCGGACTGGTCGAAGTTAGCTATGCAAGATGAAGACACAACCCGGTGGAAAGTCAT
TAGACAATTGCAGGCTATACCCGAGCTAAGTAGATTGGACAGGGCACGTTGTATGCAGACAATGGCAGGCAAATTGGACGAAATGAAAGCCTTCTTGAACTTACTCGAAG
ATATGAAGATGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTCATTCGCGATGCAATGGAATGTGCGAATGACCAGCTAAGGGCCATTGCGGACTGGTCGAAGTTAGCTATGCAAGATGAAGACACAACCCGGTGGAAAGTCAT
TAGACAATTGCAGGCTATACCCGAGCTAAGTAGATTGGACAGGGCACGTTGTATGCAGACAATGGCAGGCAAATTGGACGAAATGAAAGCCTTCTTGAACTTACTCGAAG
ATATGAAGATGGACTAG
Protein sequenceShow/hide protein sequence
MEVIRDAMECANDQLRAIADWSKLAMQDEDTTRWKVIRQLQAIPELSRLDRARCMQTMAGKLDEMKAFLNLLEDMKMD