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IVF0003381 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003381
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr05:8528879..8529031
RNA-Seq ExpressionIVF0003381
SyntenyIVF0003381
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026294.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]2.82e-1075.68Show/hide
Query:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIER
        MA+ACK +FGD+L+L +ITSIICVPKGEQVWV G ER
Subjt:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIER

KAA0032002.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]2.23e-0859.52Show/hide
Query:  CKGEFGDKLHLGEITSIICVPKGEQVWVLGIERLSPLNKKLY
        C+ EFGD LH G+ITSIIC P+  QVW +G ERL  L +K Y
Subjt:  CKGEFGDKLHLGEITSIICVPKGEQVWVLGIERLSPLNKKLY

KAA0062632.1 uncharacterized protein E6C27_scaffold79G001430 [Cucumis melo var. makuwa]2.33e-0865.79Show/hide
Query:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIERL
        MA+  K EF +KLHLG+ TSIIC PKG QVW +G+ERL
Subjt:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIERL

TYJ98051.1 LINE-1 reverse transcriptase isogeny [Cucumis melo var. makuwa]1.30e-0764.86Show/hide
Query:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIER
        MA+  K EF +KLHLG+ TSIIC PKG QVW +G+ER
Subjt:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIER

TYK07860.1 uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]1.76e-1368Show/hide
Query:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIERLSPLNKKLYKSCK
        MA+ CK EF   LH+ EITSI CVPKGEQVWVL  ERL PL +K YKS K
Subjt:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIERLSPLNKKLYKSCK

TrEMBL top hitse value%identityAlignment
A0A5A7V332 Uncharacterized protein9.0e-0665.79Show/hide
Query:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIERL
        MA+  K EF +KLHLG+ TSIIC PKG QVW +G+ERL
Subjt:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIERL

A0A5D3BHD0 LINE-1 reverse transcriptase isogeny2.0e-0564.86Show/hide
Query:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIER
        MA+  K EF +KLHLG+ TSIIC PKG QVW +G+ER
Subjt:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIER

A0A5D3C951 Uncharacterized protein4.6e-1068Show/hide
Query:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIERLSPLNKKLYKSCK
        MA+ CK EF   LH+ EITSI CVPKGEQVWVL  ERL PL +K YKS K
Subjt:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIERLSPLNKKLYKSCK

A0A5D3CY29 Transposon Ty3-I Gag-Pol polyprotein1.5e-0559.52Show/hide
Query:  CKGEFGDKLHLGEITSIICVPKGEQVWVLGIERLSPLNKKLY
        C+ EFGD LH G+ITSIIC P+  QVW +G ERL  L +K Y
Subjt:  CKGEFGDKLHLGEITSIICVPKGEQVWVLGIERLSPLNKKLY

A0A5D3DDG5 Cytochrome b561 and DOMON domain-containing protein7.4e-0875.68Show/hide
Query:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIER
        MA+ACK +FGD+L+L +ITSIICVPKGEQVWV G ER
Subjt:  MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCATGCATGCAAGGGGGAGTTTGGAGATAAACTCCACCTTGGCGAGATAACTTCCATCATTTGTGTCCCGAAAGGAGAACAAGTTTGGGTATTAGGCATTGAGAG
ATTGTCACCCTTAAACAAGAAGCTCTATAAGTCTTGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCATGCATGCAAGGGGGAGTTTGGAGATAAACTCCACCTTGGCGAGATAACTTCCATCATTTGTGTCCCGAAAGGAGAACAAGTTTGGGTATTAGGCATTGAGAG
ATTGTCACCCTTAAACAAGAAGCTCTATAAGTCTTGTAAGTGA
Protein sequenceShow/hide protein sequence
MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIERLSPLNKKLYKSCK