; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0003402 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003402
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptiontranscription termination/antitermination protein NusG
Genome locationchr08:29743133..29746114
RNA-Seq ExpressionIVF0003402
SyntenyIVF0003402
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR006645 - NusG, N-terminal
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR036735 - NusG, N-terminal domain superfamily
IPR043425 - NusG-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045071.1 transcription termination/antitermination protein NusG [Cucumis melo var. makuwa]2.85e-20099.66Show/hide
Query:  RRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQEIVERLARS
        +RTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQEIVERLARS
Subjt:  RRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQEIVERLARS

Query:  LARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERH
        LARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERH
Subjt:  LARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERH

Query:  DQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDI
        DQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDI
Subjt:  DQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDI

XP_004147896.1 uncharacterized protein LOC101211195 [Cucumis sativus]9.40e-21595.09Show/hide
Query:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY
        MA GLL+WS +SLCSTS PALSFSLSSSRRTQLS+SASVETPAAAADD QQLS R+RRKLRNERREIKTTTNWREEVEERLCRKPKKEFA WTEKLNLDY
Subjt:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVR QEIVERLAR LARNYPDLDFKIYYPSVKEKRKLKNGTYTV PKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAK+EQERHDQAFLEKEQEEAPN+SALKTDLDTNGTTATKHKGR KKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLVDLDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

XP_008448915.1 PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo]9.99e-226100Show/hide
Query:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY
        MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY
Subjt:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLVDLDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

XP_022151589.1 uncharacterized protein LOC111019492 [Momordica charantia]3.84e-20090.77Show/hide
Query:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY
        MA+GLL WS ISL S+S PALSFSLSSS+ TQLSISA++ET  AAADDVQQLSAR+RR+LRNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDY
Subjt:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSV+EKR+LKNGTY VKP+AVFPGSVFIRC+MNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAKEEQERHDQ FLEKEQE+APNS+  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVET
        VTVGFTLFGKETLVDLDIGDI+VET
Subjt:  VTVGFTLFGKETLVDLDIGDIIVET

XP_038880828.1 transcription termination/antitermination protein NusG isoform X1 [Benincasa hispida]2.77e-20993.56Show/hide
Query:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY
        MA GLLIWSPISL S S PALSFSLSS +RTQLSISA+VETP+AA DD+QQLSAR+RRKLRNERREIKTTTNWREEVEERLC+KPKKEFATWTEKLNLDY
Subjt:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        L+KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSV+EKRKLKNGTYTVKPKA+FPGSVFIRC+MNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQ+ APNSSAL+TDLDTNGTTATK KGR KKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLVDLDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

TrEMBL top hitse value%identityAlignment
A0A0A0KZV1 NGN domain-containing protein4.1e-16895.09Show/hide
Query:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY
        MA GLL+WS +SLCSTS PALSFSLSSSRRTQLS+SASVETPAAAADD QQLS R+RRKLRNERREIKTTTNWREEVEERLCRKPKKEFA WTEKLNLDY
Subjt:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVR QEIVERLAR LARNYPDLDFKIYYPSVKEKRKLKNGTYTV PKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAK+EQERHDQAFLEKEQEEAPN+SALKTDLDTNGTTATKHKGR KKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLVDLDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

A0A1S3BKU2 transcription termination/antitermination protein NusG1.9e-176100Show/hide
Query:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY
        MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY
Subjt:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLVDLDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

A0A5D3BBK0 Transcription termination/antitermination protein NusG1.6e-15697.02Show/hide
Query:  SLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARV
        SLPA   +   ++RTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARV
Subjt:  SLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARV

Query:  RGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEA
        RGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEA
Subjt:  RGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEA

Query:  IFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDL
        IFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDL
Subjt:  IFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDL

Query:  DI
        DI
Subjt:  DI

A0A6J1DDH4 uncharacterized protein LOC1110194924.3e-15790.77Show/hide
Query:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY
        MA+GLL WS ISL S+S PALSFSLSSS+ TQLSISA++ET  AAADDVQQLSAR+RR+LRNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDY
Subjt:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSV+EKR+LKNGTY VKP+AVFPGSVFIRC+MNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAKEEQERHDQ FLEKEQE+APNS+  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVET
        VTVGFTLFGKETLVDLDIGDI+VET
Subjt:  VTVGFTLFGKETLVDLDIGDIIVET

A0A6J1EV13 uncharacterized protein LOC1114382231.2e-15187.73Show/hide
Query:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY
        MA GLL W+ + L S S P+LSFSLSSS RTQLSISA++ET   AADDV QLSAR+RR+LRNERRE K TTNWREEVEERLC+KPKKEFA WTEKLNLDY
Subjt:  MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRV+RVRGQEIVERLARSLARNYPDLDFKIYYPSV EKRKLKNG+YTVKPKAVFPGSVFIRC+MNKE+HDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVS+ DMEAIFKEAKEEQERHDQAFLEKE+E+APN S L+TDLDTNGTTATKHKGR KKAVNTLSPGSTVRV+SGTFAEFEGSLKK+NRKS K
Subjt:  RQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLV+LDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

SwissProt top hitse value%identityAlignment
P35872 Transcription termination/antitermination protein NusG3.2e-0826.42Show/hide
Query:  DLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMN-----KEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHD
        D  F++  P+ +     + G   V  K +FPG +FI+  +       E  + +R   G+ GFVGA +        +P P+S  ++  I            
Subjt:  DLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMN-----KEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHD

Query:  QAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDII
                            L+ +G    K      KA      G  VRV SG FA+F G++ ++N + GKV V  T+FG+ET V+LD   ++
Subjt:  QAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDII

P65591 Transcription termination/antitermination protein NusG2.1e-0720.64Show/hide
Query:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI
        +  +W+V++      + +   L   +AR      F      V++   ++NG  T+  +  +PG V +   M  +    ++    V GF+G +        
Subjt:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV
        N+P P+S+ + E I ++         Q  +EK + +                                  G  VRV  G FA+F G ++++N +  K+ V
Subjt:  NKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV

Query:  GFTLFGKETLVDLDIGDI
           +FG+ET V+L+   +
Subjt:  GFTLFGKETLVDLDIGDI

P65592 Transcription termination/antitermination protein NusG2.1e-0720.64Show/hide
Query:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI
        +  +W+V++      + +   L   +AR      F      V++   ++NG  T+  +  +PG V +   M  +    ++    V GF+G +        
Subjt:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV
        N+P P+S+ + E I ++         Q  +EK + +                                  G  VRV  G FA+F G ++++N +  K+ V
Subjt:  NKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV

Query:  GFTLFGKETLVDLDIGDI
           +FG+ET V+L+   +
Subjt:  GFTLFGKETLVDLDIGDI

Q06795 Transcription termination/antitermination protein NusG6.5e-0927.81Show/hide
Query:  DLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQAFLE
        D  F++  P  +E+  +KNG   V  K VFPG V +  VM  +    +R   GV GFVG+         +KP P+   + E I K    ++ + D  F  
Subjt:  DLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQAFLE

Query:  KEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI
        KE                                       TV+V  G FA F GS+++++    KV V   +FG+ET V+L+   I
Subjt:  KEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI

Q9HWC4 Transcription termination/antitermination protein NusG7.1e-0819.27Show/hide
Query:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI
        +  +W+V+       + ++  L   +     + +F       +E  +++NG      +  FPG V ++  MN+     +++   V GF+G          
Subjt:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV
        +KP P+++ + +AI +   +                                      G   K      PG TVRV  G FA+F G ++++N +  ++ V
Subjt:  NKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV

Query:  GFTLFGKETLVDLDIGDI
           +FG+ T V+L+   +
Subjt:  GFTLFGKETLVDLDIGDI

Arabidopsis top hitse value%identityAlignment
AT3G09210.1 plastid transcriptionally active 132.6e-9054.55Show/hide
Query:  GLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAK
        GLL WS  SL    +P++   ++   +TQ SI+A V       +   QL+A++RR+LRNERRE K   +WREEVEE+L +KPKK +ATWTE+LNLD LA+
Subjt:  GLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAK

Query:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI
         GPQWW +RV+R+RG E  + LAR+LAR +P+++F +Y PSV+ KRKLKNG+ +VKPK VFPG +FIRC++NKEIHD IR+ DGVGGF+G+KVGNTKRQI
Subjt:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSEADMEAIFKEAKEEQERHDQAFLE--KEQEEA-----------PNSSALKTDLDT-------NGTTATKHKGRGKKAVNTLSPGSTVRVASGT
        NKP+PV ++D+EAIFK+AKE QE+ D  F E  + +EEA            NS  ++T  ++         T AT+ K + KK    L+ GSTVRV SGT
Subjt:  NKPKPVSEADMEAIFKEAKEEQERHDQAFLE--KEQEEA-----------PNSSALKTDLDT-------NGTTATKHKGRGKKAVNTLSPGSTVRVASGT

Query:  FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVE
        FAEF G+LKKLNRK+ K TVGFTLFGKETLV++DI +++ E
Subjt:  FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTATGGGCTTCTGATTTGGAGCCCAATTTCCCTTTGCTCTACCTCTTTACCTGCACTTTCCTTCTCTCTCTCTTCTTCCAGACGTACCCAATTATCAATATCCGC
CTCCGTCGAAACCCCCGCCGCCGCCGCTGATGATGTTCAGCAGCTGTCGGCAAGGGATCGGAGGAAGCTGAGGAACGAGAGAAGAGAGATTAAAACCACCACCAATTGGA
GGGAAGAAGTAGAAGAGAGGCTCTGCAGGAAGCCCAAGAAGGAATTTGCCACTTGGACTGAGAAGCTCAACCTTGATTACCTCGCTAAATTGGGTCCTCAATGGTGGGTT
ATGCGTGTTGCTCGTGTTCGAGGCCAAGAAATTGTCGAACGCCTTGCTCGTTCTCTTGCTAGGAACTACCCTGACCTCGATTTTAAGATATATTACCCGTCGGTTAAGGA
GAAGAGGAAATTAAAGAATGGTACTTACACCGTTAAACCGAAAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTGTCATGAACAAGGAGATTCATGACTTCATTAGAG
AGTGTGATGGAGTTGGAGGCTTTGTTGGTGCGAAGGTCGGAAACACTAAACGACAGATAAATAAACCGAAGCCAGTATCCGAAGCTGACATGGAAGCAATCTTCAAAGAG
GCAAAGGAAGAGCAAGAAAGACACGACCAGGCTTTCCTAGAGAAAGAGCAAGAGGAAGCTCCAAACTCTAGCGCACTCAAAACTGACTTAGATACAAATGGTACTACTGC
TACGAAGCACAAAGGAAGAGGCAAAAAAGCTGTTAATACTTTGTCGCCAGGGTCAACAGTTCGAGTGGCATCAGGGACTTTTGCAGAATTTGAAGGCTCTCTTAAGAAGC
TGAACCGTAAAAGTGGAAAGGTAACTGTGGGATTCACACTATTTGGGAAGGAAACCCTTGTAGATCTTGACATTGGTGATATTATAGTAGAGACAAAATGA
mRNA sequenceShow/hide mRNA sequence
AAACTATCCAGCCGGGCCCAAGAAAACGTATCACCTATTCTCAAAGCCGACAAATCGGCTCGCAACCCAAATTATCTTCTTCATCAACCAAACGACAAATGGGAGTTTCA
ATAACGACCACTCATCGGCGTTTATCGTTGCCGGCGACTCCACAGCCTACCCAGTAATTGGAAACTTGTTTCCGCAAGCACAATGGCCTATGGGCTTCTGATTTGGAGCC
CAATTTCCCTTTGCTCTACCTCTTTACCTGCACTTTCCTTCTCTCTCTCTTCTTCCAGACGTACCCAATTATCAATATCCGCCTCCGTCGAAACCCCCGCCGCCGCCGCT
GATGATGTTCAGCAGCTGTCGGCAAGGGATCGGAGGAAGCTGAGGAACGAGAGAAGAGAGATTAAAACCACCACCAATTGGAGGGAAGAAGTAGAAGAGAGGCTCTGCAG
GAAGCCCAAGAAGGAATTTGCCACTTGGACTGAGAAGCTCAACCTTGATTACCTCGCTAAATTGGGTCCTCAATGGTGGGTTATGCGTGTTGCTCGTGTTCGAGGCCAAG
AAATTGTCGAACGCCTTGCTCGTTCTCTTGCTAGGAACTACCCTGACCTCGATTTTAAGATATATTACCCGTCGGTTAAGGAGAAGAGGAAATTAAAGAATGGTACTTAC
ACCGTTAAACCGAAAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTGTCATGAACAAGGAGATTCATGACTTCATTAGAGAGTGTGATGGAGTTGGAGGCTTTGTTGG
TGCGAAGGTCGGAAACACTAAACGACAGATAAATAAACCGAAGCCAGTATCCGAAGCTGACATGGAAGCAATCTTCAAAGAGGCAAAGGAAGAGCAAGAAAGACACGACC
AGGCTTTCCTAGAGAAAGAGCAAGAGGAAGCTCCAAACTCTAGCGCACTCAAAACTGACTTAGATACAAATGGTACTACTGCTACGAAGCACAAAGGAAGAGGCAAAAAA
GCTGTTAATACTTTGTCGCCAGGGTCAACAGTTCGAGTGGCATCAGGGACTTTTGCAGAATTTGAAGGCTCTCTTAAGAAGCTGAACCGTAAAAGTGGAAAGGTAACTGT
GGGATTCACACTATTTGGGAAGGAAACCCTTGTAGATCTTGACATTGGTGATATTATAGTAGAGACAAAATGAATGAATGTACTTTCTCAGTCATGTAAAGTGTGGAAGA
AATTCTCGGAGTTGGAGGATAAGCAAGCAGCTCCAGCTCTCAGCTCTCAAAGCACATCCATGAACCAAAGAACATGAAAGTACTGTTGCTTGAATTGCCAAACAGCTCAC
GTTGATGAACATGTCCACAAATCAGCTTTGCTTCTTTGAAATTACTCTGCATTTGGAGATTCTTATTGGAAATCAAATAGAATCTTGAAGGAATTGGCAGCCAAATGTAT
TCTTGTTAGACTTTTGAGAAAATCAAACTAGGAAATATTATGATGAAATCATACCTGAGTAGCACTTGTAAATTCAAATATTTCTGAAGTCACAAATTCTAACCATAATT
ATAGAGGTGTTCATGGTTCGATTCAATCTAACTGTCAAACCGGAC
Protein sequenceShow/hide protein sequence
MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKLRNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWV
MRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKE
AKEEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVETK