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IVF0003408 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003408
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLow-density receptor-like protein
Genome locationchr11:26629123..26630880
RNA-Seq ExpressionIVF0003408
SyntenyIVF0003408
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458514.1 PREDICTED: uncharacterized protein LOC103497900 isoform X1 [Cucumis melo]5.78e-57100Show/hide
Query:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
        MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
Subjt:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
XP_008458516.1 PREDICTED: uncharacterized protein LOC103497900 isoform X2 [Cucumis melo]3.39e-57100Show/hide
Query:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
        MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
Subjt:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
XP_011656652.1 uncharacterized protein LOC101217077 isoform X2 [Cucumis sativus]3.23e-5597.85Show/hide
Query:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
        MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV DGNDGKKAGS AIRRLLHQ
Subjt:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
XP_011656653.1 uncharacterized protein LOC101217077 isoform X3 [Cucumis sativus]2.29e-5597.85Show/hide
Query:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
        MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV DGNDGKKAGS AIRRLLHQ
Subjt:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
XP_031742567.1 uncharacterized protein LOC101217077 isoform X1 [Cucumis sativus]4.16e-5597.85Show/hide
Query:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
        MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV DGNDGKKAGS AIRRLLHQ
Subjt:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
TrEMBL top hitse value%identityAlignment
A0A0A0KBE9 Uncharacterized protein5.8e-4197.85Show/hide
Query:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
        MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV DGNDGKKAGS AIRRLLHQ
Subjt:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
A0A1S3C7I8 uncharacterized protein LOC103497900 isoform X22.4e-42100Show/hide
Query:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
        MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
Subjt:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
A0A1S3C994 uncharacterized protein LOC103497900 isoform X12.4e-42100Show/hide
Query:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
        MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
Subjt:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
A0A6J1ER65 uncharacterized protein LOC111436812 isoform X47.1e-3988.54Show/hide
Query:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQNMM
        MASS A+ITFRV+MVV+LLLV+FYVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSGV DG DGKKAGSVA RRLLHQ  M
Subjt:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQNMM
A0A6J1L4G6 uncharacterized protein LOC1114990617.1e-3991.4Show/hide
Query:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
        MASSTA+ITFRV+MVVILLLV+FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV++GNDGK +GS AIRRLLHQ
Subjt:  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18850.1 unknown protein1.1e-2865.56Show/hide
Query:  ASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLL
        +S T +I FR ++++ L++VLFYVGRPLYWKISAT+HDIR NKQ+V+EG+SQIV EAQ+SVGWYHDESDSG ++G++ KK+G    RRLL
Subjt:  ASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGTCGACGGCTAAGATTACGTTTCGTGTTATCATGGTGGTGATCCTCCTCCTCGTCTTGTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCTACTGT
ACATGATATTCGTCAGAACAAACAGACCGTCAAAGAAGGCCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCATGATGAGTCGGACTCGGGCGTCC
AAGATGGAAATGATGGAAAGAAAGCCGGATCGGTTGCTATTCGGAGGCTGCTTCATCAGAATATGATGGATTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGTCGACGGCTAAGATTACGTTTCGTGTTATCATGGTGGTGATCCTCCTCCTCGTCTTGTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCTACTGT
ACATGATATTCGTCAGAACAAACAGACCGTCAAAGAAGGCCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCATGATGAGTCGGACTCGGGCGTCC
AAGATGGAAATGATGGAAAGAAAGCCGGATCGGTTGCTATTCGGAGGCTGCTTCATCAGAATATGATGGATTTCTAA
Protein sequenceShow/hide protein sequence
MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQNMMDF