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IVF0003440 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003440
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionChloride channel protein
Genome locationchr11:1051341..1051586
RNA-Seq ExpressionIVF0003440
SyntenyIVF0003440
Gene Ontology termsGO:0009826 - unidimensional cell growth (biological process)
GO:0045824 - negative regulation of innate immune response (biological process)
GO:1902476 - chloride transmembrane transport (biological process)
GO:0005802 - trans-Golgi network (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005247 - voltage-gated chloride channel activity (molecular function)
GO:0015108 - chloride transmembrane transporter activity (molecular function)
InterPro domainsIPR014743 - Chloride channel, core


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN48017.1 hypothetical protein Csa_003947 [Cucumis sativus]5.57e-2094.12Show/hide
Query:  GMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
         +CVIMVEISNNLK LPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
Subjt:  GMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

XP_008449563.1 PREDICTED: chloride channel protein CLC-d [Cucumis melo]5.57e-2094.12Show/hide
Query:  GMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
         +CVIMVEISNNLK LPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
Subjt:  GMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

XP_011657577.1 chloride channel protein CLC-d [Cucumis sativus]5.57e-2094.12Show/hide
Query:  GMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
         +CVIMVEISNNLK LPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
Subjt:  GMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

XP_022959118.1 chloride channel protein CLC-d isoform X2 [Cucurbita moschata]5.57e-2094.12Show/hide
Query:  GMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
         +CVIMVEISNNLK LPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
Subjt:  GMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

XP_023548210.1 chloride channel protein CLC-d isoform X2 [Cucurbita pepo subsp. pepo]5.57e-2094.12Show/hide
Query:  GMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
         +CVIMVEISNNLK LPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
Subjt:  GMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

TrEMBL top hitse value%identityAlignment
A0A0A0KI42 Chloride channel protein5.9e-1692.31Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVIMVEISNNLK LPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

A0A1S3BMB3 Chloride channel protein5.9e-1692.31Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVIMVEISNNLK LPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

A0A5D3DCE9 Chloride channel protein5.9e-1692.31Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVIMVEISNNLK LPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

A0A6J1H3N7 Chloride channel protein5.9e-1692.31Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVIMVEISNNLK LPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

A0A6J1H514 Chloride channel protein5.9e-1692.31Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVIMVEISNNLK LPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

SwissProt top hitse value%identityAlignment
P60300 Putative chloride channel-like protein CLC-g8.2e-0752.08Show/hide
Query:  CVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLL
        CVI++E++NNL +LP++M+VLL+SK V D FN  +Y    +LKG P L
Subjt:  CVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLL

P92941 Chloride channel protein CLC-a5.6e-0851.92Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVI +E++NNL +LP+ M VLL++K VGD+FN  +YE    LKG+P LE
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

P92942 Chloride channel protein CLC-b4.3e-0850Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVI +E++NNL +LP+ M+VLL++K VGD+FN  +Y+    LKG+P LE
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

P92943 Chloride channel protein CLC-d1.1e-1684.62Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVIMVEI+NNLK+LPLIMLVLL+SKAVGDAFNEGLYE QA+LKGIPLLE
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

Q96282 Chloride channel protein CLC-c2.3e-0951.92Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVI++E++NNL +LPL+MLVLL+SK V D FN G+Y++   +KG+P +E
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

Arabidopsis top hitse value%identityAlignment
AT3G27170.1 chloride channel B3.1e-0950Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVI +E++NNL +LP+ M+VLL++K VGD+FN  +Y+    LKG+P LE
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

AT5G26240.1 chloride channel D8.1e-1884.62Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVIMVEI+NNLK+LPLIMLVLL+SKAVGDAFNEGLYE QA+LKGIPLLE
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

AT5G40890.1 chloride channel A4.0e-0951.92Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVI +E++NNL +LP+ M VLL++K VGD+FN  +YE    LKG+P LE
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

AT5G40890.2 chloride channel A4.0e-0951.92Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVI +E++NNL +LP+ M VLL++K VGD+FN  +YE    LKG+P LE
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE

AT5G49890.1 chloride channel C1.6e-1051.92Show/hide
Query:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE
        + +CVI++E++NNL +LPL+MLVLL+SK V D FN G+Y++   +KG+P +E
Subjt:  MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATGTGCGTCATCATGGTTGAAATTTCAAACAATTTGAAAATTTTACCTCTCATCATGCTTGTACTTCTGATGTCCAAGGCTGTTGGTGATGCCTTTAATGAAGG
CCTGTATGAAGAGCAAGCCCAATTGAAGGGTATTCCATTACTGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATGTGCGTCATCATGGTTGAAATTTCAAACAATTTGAAAATTTTACCTCTCATCATGCTTGTACTTCTGATGTCCAAGGCTGTTGGTGATGCCTTTAATGAAGG
CCTGTATGAAGAGCAAGCCCAATTGAAGGGTATTCCATTACTGGAATGA
Protein sequenceShow/hide protein sequence
MGMCVIMVEISNNLKILPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLE