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IVF0003452 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003452
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionS locus-related glycoprotein 1 binding pollen coat
Genome locationchr08:16299338..16299752
RNA-Seq ExpressionIVF0003452
SyntenyIVF0003452
Gene Ontology termsNA
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07492.1 hypothetical protein Prudu_019451 [Prunus dulcis]1.10e-0947.37Show/hide
Query:  VPQETSATKCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC
        VPQ  +  +C ++LY  GCT SDC  KC + HH    KCI+ +   T YACYC +NC
Subjt:  VPQETSATKCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC

KAA0042348.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]6.22e-1951.81Show/hide
Query:  MANVSSSRVAIIIVIFAVSMILVPQETSATK-CQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCHAN
        M  + SS +  I +  AV+MILVPQ   A + CQD+LY  GCT +DC  KC + HH  + +CI TDP  T YACYCFYNC  N
Subjt:  MANVSSSRVAIIIVIFAVSMILVPQETSATK-CQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCHAN

KAE8649772.1 hypothetical protein Csa_012405, partial [Cucumis sativus]1.13e-1146.77Show/hide
Query:  SMILVPQETSAT-KCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC
        +++L  Q+ SA  +CQD LY  GC  +DC  KC + HH  + +CI T+P+ T YACYCF++C
Subjt:  SMILVPQETSAT-KCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC

KGN52439.1 hypothetical protein Csa_009048 [Cucumis sativus]9.97e-1041.67Show/hide
Query:  LVPQETSATKCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCHA
        ++P   SATKC+ +LY  GC   DC  KCS  +   +++C++  P    Y+CYCFY+C A
Subjt:  LVPQETSATKCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCHA

KGN64987.1 hypothetical protein Csa_022748 [Cucumis sativus]2.01e-1950.63Show/hide
Query:  MANVSSSRVAIIIVIFAVSMILVPQETSATKCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC
        M  + SS +  I++I AV+MI +PQ   A +CQD LY  GCT +DC  KC + HH  + +CI TDP  T YACYCFY C
Subjt:  MANVSSSRVAIIIVIFAVSMILVPQETSATKCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC

TrEMBL top hitse value%identityAlignment
A0A0A0KYP7 Uncharacterized protein1.9e-3984.85Show/hide
Query:  MFLQFTQQNQASTCTKNMANVSSSRVAIIIVIFAVSMILVPQETSATKCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCHAN
        MFLQFTQQNQA T TK MAN+SS RVAIIIVIFAVSMILVPQ TSA KCQDRLYVGGC Q +C  KCSQLHHGGT+KCISTDPTFTKYACYCFYNC  N
Subjt:  MFLQFTQQNQASTCTKNMANVSSSRVAIIIVIFAVSMILVPQETSATKCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCHAN

A0A0A0L2R3 Uncharacterized protein6.3e-1146.75Show/hide
Query:  VSSSRVAIIIVIFAVSMILVPQETSAT-KCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC
        + SSR+    +IFAV+++L  Q+ SA  +CQD LY  GC  +DC  KC + HH  + +CI T+P+ T YACYCF++C
Subjt:  VSSSRVAIIIVIFAVSMILVPQETSAT-KCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC

A0A0A0LVZ5 Uncharacterized protein6.1e-1450.63Show/hide
Query:  MANVSSSRVAIIIVIFAVSMILVPQETSATKCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC
        M  + SS +  I++I AV+MI +PQ   A +CQD LY  GCT +DC  KC + HH  + +CI TDP  T YACYCFY C
Subjt:  MANVSSSRVAIIIVIFAVSMILVPQETSATKCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC

A0A4Y1RT05 Uncharacterized protein1.2e-0647.37Show/hide
Query:  VPQETSATKCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC
        VPQ  +  +C ++LY  GCT SDC  KC + HH    KCI+ +   T YACYC +NC
Subjt:  VPQETSATKCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC

A0A5A7THQ7 S locus-related glycoprotein 1 binding pollen coat1.0e-1351.81Show/hide
Query:  MANVSSSRVAIIIVIFAVSMILVPQETSAT-KCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCHAN
        M  + SS +  I +  AV+MILVPQ   A  +CQD+LY  GCT +DC  KC + HH  + +CI TDP  T YACYCFYNC  N
Subjt:  MANVSSSRVAIIIVIFAVSMILVPQETSAT-KCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCHAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G48905.1 low-molecular-weight cysteine-rich 123.3e-0433.8Show/hide
Query:  IIIVIFAVSMILVPQETSATKCQDRLYVG-GCTQSDCAHKC-SQLHHGGTAKCISTDPTFTKYACYCFYNC
        +++V+F+V + ++P+  +  +C+  L  G  C  + C   C  QL   G   CI   P  +KY C CFYNC
Subjt:  IIIVIFAVSMILVPQETSATKCQDRLYVG-GCTQSDCAHKC-SQLHHGGTAKCISTDPTFTKYACYCFYNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTGCAATTCACTCAACAAAATCAAGCTAGCACTTGCACCAAAAACATGGCAAACGTTTCTTCTTCTCGTGTCGCCATCATTATAGTTATCTTTGCAGTTTCAAT
GATTTTGGTACCGCAAGAAACCTCAGCTACAAAATGTCAAGACAGATTGTATGTTGGCGGGTGCACACAAAGTGATTGTGCGCATAAATGTAGTCAGCTACACCATGGTG
GCACAGCTAAATGCATATCTACTGATCCTACGTTCACCAAGTATGCTTGTTATTGTTTCTATAATTGTCATGCAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTGCAATTCACTCAACAAAATCAAGCTAGCACTTGCACCAAAAACATGGCAAACGTTTCTTCTTCTCGTGTCGCCATCATTATAGTTATCTTTGCAGTTTCAAT
GATTTTGGTACCGCAAGAAACCTCAGCTACAAAATGTCAAGACAGATTGTATGTTGGCGGGTGCACACAAAGTGATTGTGCGCATAAATGTAGTCAGCTACACCATGGTG
GCACAGCTAAATGCATATCTACTGATCCTACGTTCACCAAGTATGCTTGTTATTGTTTCTATAATTGTCATGCAAATTGA
Protein sequenceShow/hide protein sequence
MFLQFTQQNQASTCTKNMANVSSSRVAIIIVIFAVSMILVPQETSATKCQDRLYVGGCTQSDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCHAN