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IVF0003454 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003454
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA-binding protein
Genome locationchr10:2274709..2277116
RNA-Seq ExpressionIVF0003454
SyntenyIVF0003454
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032230.1 hypothetical protein SDJN02_06273 [Cucurbita argyrosperma subsp. argyrosperma]5.12e-10786.7Show/hide
Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
        MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG ++ ITLPEDVYV+KFFQKHPDS Y DAIKF  F+P PARIF  RVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE

Query:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRG-GW
        EAMA ANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNP+PSAIK+IQAEERK+VRDRFFNPKIKEIAQRLKEE+AAEMQ+R RG GW
Subjt:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRG-GW
XP_004135170.1 uncharacterized protein LOC101217717 [Cucumis sativus]5.82e-10888.17Show/hide
Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
        MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPP+FPRVDG ++ ITLPEDVYVKKFF+KHPDS YHDAIKF  FNP PARIFAWRVLELKEQGV+EE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE

Query:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGG
        EAM  ANMEYRAEKKMKK AYSRLKQIARLQGKKPP NP+PSAIK+IQAEERK+VRDRFF+PKIKEIAQRLKEE+AAEMQER  GG
Subjt:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGG
XP_008446390.1 PREDICTED: uncharacterized protein LOC103489146 [Cucumis melo]1.21e-125100Show/hide
Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
        MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE

Query:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGGW
        EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGGW
Subjt:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGGW
XP_022957544.1 uncharacterized protein LOC111458914 [Cucurbita moschata]1.26e-10787.23Show/hide
Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
        MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG ++ ITLPEDVYVKKFFQKHPDS Y DAIKF  F+P PARIF  RVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE

Query:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRG-GW
        EAMA ANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNP+PSAIK+IQAEERK+VRDRFFNPKIKEIAQRLKEE+AAEMQ+R RG GW
Subjt:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRG-GW
XP_022996766.1 uncharacterized protein LOC111491881 [Cucurbita maxima]4.14e-10787.23Show/hide
Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
        MSFMKGDLL++TRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG V+ ITLPEDVYVKKFFQKHPDS Y DAIKF  F+P PARIF  RVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE

Query:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRG-GW
        EAMA ANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNP+PSAIK+IQAEERK+VRDRFFNPKIKEIAQRLKEE+AAEMQ+R RG GW
Subjt:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRG-GW
TrEMBL top hitse value%identityAlignment
A0A0A0KQQ3 Uncharacterized protein1.3e-8488.17Show/hide
Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
        MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPP+FPRVDG ++ ITLPEDVYVKKFF+KHPDS YHDAIKF  FNP PARIFAWRVLELKEQGV+EE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE

Query:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGG
        EAM  ANMEYRAEKKMKK AYSRLKQIARLQGKKPP NP+PSAIK+IQAEERK+VRDRFF+PKIKEIAQRLKEE+AAEMQER  GG
Subjt:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGG
A0A1S3BEG4 uncharacterized protein LOC1034891464.4e-98100Show/hide
Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
        MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE

Query:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGGW
        EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGGW
Subjt:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGGW
A0A5A7SZA7 Uncharacterized protein4.4e-98100Show/hide
Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
        MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE

Query:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGGW
        EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGGW
Subjt:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGGW
A0A6J1GZF0 uncharacterized protein LOC1114589142.1e-8487.23Show/hide
Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
        MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG ++ ITLPEDVYVKKFFQKHPDS Y DAIKF  F+P PARIF  RVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE

Query:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRG-GW
        EAMA ANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNP+PSAIK+IQAEERK+VRDRFFNPKIKEIAQRLKEE+AAEMQ+R RG GW
Subjt:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRG-GW
A0A6J1KC52 uncharacterized protein LOC1114918814.8e-8487.23Show/hide
Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
        MSFMKGDLL++TRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG V+ ITLPEDVYVKKFFQKHPDS Y DAIKF  F+P PARIF  RVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE

Query:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRG-GW
        EAMA ANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNP+PSAIK+IQAEERK+VRDRFFNPKIKEIAQRLKEE+AAEMQ+R RG GW
Subjt:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRG-GW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26750.1 unknown protein2.6e-5054.59Show/hide
Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE
        MS+MKGDLL+KTR+LV GLA  EPVWLKAME +PPP FPR +GK+QKI LPED YV+KF  KHP +   D  K   F P  AR++  RVLELKE G+SE 
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEE

Query:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRG
        +AM+ ANMEY +E+K  KKAY RLK++A +Q K PPP P+PSA K +  + +   +DRF  P ++ +  +LK EK   +Q+R  G
Subjt:  EAMAAANMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTCATGAAAGGAGACTTGCTAACTAAGACTAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTGTTTGGCTCAAAGCCATGGAGCAGGCGCCACCTCCTAC
ATTTCCCCGAGTAGATGGAAAAGTTCAGAAAATCACTCTTCCCGAGGATGTATATGTAAAAAAGTTCTTCCAGAAACATCCAGACTCAGCATACCACGATGCCATCAAGT
TCTTGGACTTTAATCCTGTTCCAGCCCGAATATTTGCCTGGCGGGTGCTTGAACTGAAGGAACAAGGTGTCAGTGAGGAGGAAGCCATGGCAGCAGCCAATATGGAATAC
CGGGCAGAGAAAAAGATGAAAAAGAAGGCGTACTCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAACCTCCTCCTAACCCTTTTCCAAGTGCTATAAAGCAGAT
ACAAGCCGAGGAAAGGAAATACGTCCGGGATCGTTTCTTCAATCCCAAGATTAAAGAGATTGCACAAAGGTTGAAGGAGGAGAAAGCAGCTGAAATGCAGGAAAGGAAGC
GAGGCGGCTGGTGA
mRNA sequenceShow/hide mRNA sequence
GCCGTCTTGTTCCTTCCCCATTCTGAAGAAGAGATTAGCTGAAGGAATCTCTCTCCAGTTTCATCTTGATCGTATCATCTGTAGATTACTGGTATCTAATCACAATCCAA
GAAGGAGGGAGCTATGTCCTTCATGAAAGGAGACTTGCTAACTAAGACTAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTGTTTGGCTCAAAGCCATGGAGCAGG
CGCCACCTCCTACATTTCCCCGAGTAGATGGAAAAGTTCAGAAAATCACTCTTCCCGAGGATGTATATGTAAAAAAGTTCTTCCAGAAACATCCAGACTCAGCATACCAC
GATGCCATCAAGTTCTTGGACTTTAATCCTGTTCCAGCCCGAATATTTGCCTGGCGGGTGCTTGAACTGAAGGAACAAGGTGTCAGTGAGGAGGAAGCCATGGCAGCAGC
CAATATGGAATACCGGGCAGAGAAAAAGATGAAAAAGAAGGCGTACTCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAACCTCCTCCTAACCCTTTTCCAAGTG
CTATAAAGCAGATACAAGCCGAGGAAAGGAAATACGTCCGGGATCGTTTCTTCAATCCCAAGATTAAAGAGATTGCACAAAGGTTGAAGGAGGAGAAAGCAGCTGAAATG
CAGGAAAGGAAGCGAGGCGGCTGGTGATGGAATATTCCATTCACCCATCCCTGCTTCTGGAAACTAGCTTTTGCAATAATTTTGACAGTTCAGTAATTGAGAATATTGTT
AGATTCAAGCGAACACCATATCTGAAGCATTGGTTCAAGTATGTTAAAAGATTTTCCTTTTGATGTTATTTAATTATTCGATGGGTGACCCTCTCTGAAGGTGGCAATGC
CAATGCGCACCTTGATAAATGTTCGATCAACTTTTAATCATATTGATCCAACTCAATTTACATCAGTTTTTTCTATATTACATTATTTTTTACAATGGAACATATAGGAA
TCTAGAGATAATTGTATAATAGACCTCAATCTAGAAATTTAAAATGTTTCTTTTTT
Protein sequenceShow/hide protein sequence
MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFFQKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEEEAMAAANMEY
RAEKKMKKKAYSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQERKRGGW