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IVF0003455 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003455
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Genome locationchr11:22792023..22795890
RNA-Seq ExpressionIVF0003455
SyntenyIVF0003455
Gene Ontology termsGO:0032259 - methylation (biological process)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR010719 - Putative rRNA methylase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139901.1 uncharacterized protein LOC101214958 isoform X1 [Cucumis sativus]2.96e-5444.91Show/hide
Query:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS----------------
        MLSLKFGSKWVAVATSES+VGRQRHLR LCCFSNRI SNGLSSQYQID NSPLSSKHSLSLEGLEDVM GYFFGKK+ATEVAHS                
Subjt:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------YV------EELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR
                         YV      EELETIE FSSDLAVENWICCKLQMLNRPLAPVPVFLFKR
Subjt:  -----------------YV------EELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR

XP_008456440.1 PREDICTED: uncharacterized protein LOC103496382 [Cucumis melo]4.88e-52100Show/hide
Query:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS
        MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS
Subjt:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS

XP_011656977.1 uncharacterized protein LOC101214958 isoform X2 [Cucumis sativus]2.03e-5445.08Show/hide
Query:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS----------------
        MLSLKFGSKWVAVATSES+VGRQRHLR LCCFSNRI SNGLSSQYQID NSPLSSKHSLSLEGLEDVM GYFFGKK+ATEVAHS                
Subjt:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------YV------EELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR
                        YV      EELETIE FSSDLAVENWICCKLQMLNRPLAPVPVFLFKR
Subjt:  ----------------YV------EELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR

XP_038902809.1 putative rRNA methylase YtqB isoform X2 [Benincasa hispida]2.73e-4139.02Show/hide
Query:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS----------------
        MLSLKFGSKWVAVA  + +VG QRH+R++C  +NRI SNGLSS+YQID NSPLS K   SLEGLEDVM GYFFGKK+ATEVAHS                
Subjt:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------YV------EELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR
                        YV      EELETI+ FSSDLAVENWICCKLQMLNRPLAPVPVFLFKR
Subjt:  ----------------YV------EELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR

XP_038902810.1 uncharacterized protein LOC120089422 isoform X3 [Benincasa hispida]5.15e-4947.89Show/hide
Query:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS----------------
        MLSLKFGSKWVAVA  + +VG QRH+R++C  +NRI SNGLSS+YQID NSPLS K   SLEGLEDVM GYFFGKK+ATEVAHS                
Subjt:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS----------------

Query:  -----------------------YV------------------------------------------------EELETIENFSSDLAVENWICCKLQMLN
                               Y                                                 EELETI+ FSSDLAVENWICCKLQMLN
Subjt:  -----------------------YV------------------------------------------------EELETIENFSSDLAVENWICCKLQMLN

Query:  RPLAPVPVFLFKR
        RPLAPVPVFLFKR
Subjt:  RPLAPVPVFLFKR

TrEMBL top hitse value%identityAlignment
A0A0A0KEF8 Uncharacterized protein5.2e-4244.15Show/hide
Query:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHSY---------------
        MLSLKFGSKWVAVATSES+VGRQRHLR LCCFSNRI SNGLSSQYQID NSPLSSKHSLSLEGLEDVM GYFFGKK+ATEVAHS                
Subjt:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHSY---------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------VEELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR
                                +EELETIE FSSDLAVENWICCKLQMLNRPLAPVPVFLFKR
Subjt:  ------------------------VEELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR

A0A1S3C4I7 uncharacterized protein LOC1034963821.2e-38100Show/hide
Query:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS
        MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS
Subjt:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHS

A0A6J1D648 uncharacterized protein LOC111017978 isoform X23.7e-2434.85Show/hide
Query:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHSY---------------
        MLSLKFG K VAV T + +V RQRH R+L   SN I SNGLS +YQ + +SP SSK   SLEGLEDVM GY  GKK+ATEVAHS                
Subjt:  MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHSY---------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------VEELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR
                               VEELETI+ F+S+LAVENWICCKLQMLNRPLAPVPVFLFKR
Subjt:  -----------------------VEELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR

A0A6J1FUH7 uncharacterized protein LOC1114482482.7e-3037.41Show/hide
Query:  MLSLKFGSKWVAV-ATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHS----LSLEGLEDVMAGYFFGKKKATEVAHSY----------
        MLSLKFG KWVAV A SE +VGRQRHLR+ CCFSNRIHSNG+SS+YQ D +SP SS  S     SLEGLEDVM GY FGKK+ATEVAHS           
Subjt:  MLSLKFGSKWVAV-ATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHS----LSLEGLEDVMAGYFFGKKKATEVAHSY----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------VEELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR
                                     +EELETI+ FS +L VENWICCKLQMLNRPLAPVPVFLFKR
Subjt:  -----------------------------VEELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR

A0A6J1J6K5 uncharacterized protein LOC1114839291.0e-2937.45Show/hide
Query:  MLSLKFGSKWVAV-ATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSP-LSSKHSLSLEGLEDVMAGYFFGKKKATEVAHSY-------------
        MLSLKFG KWVAV A SE +VGRQRHLR+LCCFSNRIHSNG+SS+YQ   +SP  SSK   SLEGLEDVM GY FGKK+ATEVAHS              
Subjt:  MLSLKFGSKWVAV-ATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSP-LSSKHSLSLEGLEDVMAGYFFGKKKATEVAHSY-------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------VEELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR
                                  +EEL+TI+ FS +L VENWICCKLQMLNRPLAPVPVFLFKR
Subjt:  --------------------------VEELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16445.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein6.1e-1172.5Show/hide
Query:  EELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR
        EELE +E F S L V +WICCK QMLNRPLAPV VF+FKR
Subjt:  EELETIENFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR

AT1G16445.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein2.5e-0450Show/hide
Query:  NSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHSYVEEL
        +S  S   +  + GLEDV  GY FG+KKATEVAH   E++
Subjt:  NSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHSYVEEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATCTTTGAAATTTGGGTCAAAATGGGTGGCGGTTGCTACCTCCGAATCACTCGTAGGACGTCAAAGACACTTGAGAAGTCTTTGCTGTTTTTCTAACCGTATTCA
TTCAAACGGGTTATCTTCTCAATATCAGATTGATGTCAATTCACCATTGTCGTCGAAACATTCTTTGTCTTTGGAAGGACTGGAGGATGTCATGGCCGGCTACTTTTTTG
GGAAGAAGAAGGCGACAGAAGTTGCTCACTCGTATGTGGAAGAATTGGAGACCATTGAAAATTTTTCTAGCGACCTGGCTGTTGAGAATTGGATTTGTTGTAAGCTACAG
ATGTTAAACCGGCCACTAGCTCCAGTGCCTGTGTTCTTATTCAAGAGATGA
mRNA sequenceShow/hide mRNA sequence
CCGACGACCGCACAGACGGAAGCTCCGGTGAAGATAACCCATAAAGTTGGGAGAAATGTTATCTTTGAAATTTGGGTCAAAATGGGTGGCGGTTGCTACCTCCGAATCAC
TCGTAGGACGTCAAAGACACTTGAGAAGTCTTTGCTGTTTTTCTAACCGTATTCATTCAAACGGGTTATCTTCTCAATATCAGATTGATGTCAATTCACCATTGTCGTCG
AAACATTCTTTGTCTTTGGAAGGACTGGAGGATGTCATGGCCGGCTACTTTTTTGGGAAGAAGAAGGCGACAGAAGTTGCTCACTCGTATGTGGAAGAATTGGAGACCAT
TGAAAATTTTTCTAGCGACCTGGCTGTTGAGAATTGGATTTGTTGTAAGCTACAGATGTTAAACCGGCCACTAGCTCCAGTGCCTGTGTTCTTATTCAAGAGATGAAAGT
GACAGTTTATGAAGTTGGCTCATACATGGTTCGCTTGCTATTGCCTCTTTTGGTAGCCTTGGTGACATTGGATAATTTCATATCAATTTTTTCATGCAGCTTGATTACCA
CAGGTAAGTCACAGTAAAGTTATAATATAGTATAGCTCAATGTTACTTGACATGTATTTATTTTATTGAAGTTAGGGGTTCAAATCTCTTATGTGTCACTTGTACTAAGA
AAATGGAGTACTATCAATTTCATGCTGATCAATAAGGCTTGTTGACTTGAGTTAAAATGTTGATGGATTGAACCCCTAACTTTTAAGGCGAATAGAAAATGTCATTATGT
TGAACTAATTTTTTACACTA
Protein sequenceShow/hide protein sequence
MLSLKFGSKWVAVATSESLVGRQRHLRSLCCFSNRIHSNGLSSQYQIDVNSPLSSKHSLSLEGLEDVMAGYFFGKKKATEVAHSYVEELETIENFSSDLAVENWICCKLQ
MLNRPLAPVPVFLFKR