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IVF0003467 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003467
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr09:3088206..3088373
RNA-Seq ExpressionIVF0003467
SyntenyIVF0003467
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060795.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.35e-0862.22Show/hide
Query:  MCDSGCGGAGRLGFASFDDRCTACNGVADRAAGDAADLVAAAGGR
        +CDSGCGG  +LGFA FDDR + C+GVA+RAA + AD VA   GR
Subjt:  MCDSGCGGAGRLGFASFDDRCTACNGVADRAAGDAADLVAAAGGR
TYK28998.1 putative ribonuclease [Cucumis melo var. makuwa]7.87e-0778.38Show/hide
Query:  AGRLGFASFDDRCTACNGVADRAAGDAADLVAAAGGR
        A +LGF   DDRC ACNGVADRAAGDAA+LVAA+GGR
Subjt:  AGRLGFASFDDRCTACNGVADRAAGDAADLVAAAGGR
TrEMBL top hitse value%identityAlignment
A0A5A7V4I8 Ty3-gypsy retrotransposon protein3.8e-0562.22Show/hide
Query:  MCDSGCGGAGRLGFASFDDRCTACNGVADRAAGDAADLVAAAGGR
        +CDSGCGG  +LGFA FDDR + C+GVA+RAA + AD VA   GR
Subjt:  MCDSGCGGAGRLGFASFDDRCTACNGVADRAAGDAADLVAAAGGR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGACTCGGGTTGCGGAGGCGCGGGGCGACTGGGCTTCGCAAGCTTCGACGACCGGTGCACGGCTTGTAATGGCGTGGCTGATCGAGCAGCTGGCGACGCGGCTGA
TCTCGTGGCGGCAGCTGGCGGAAGAAATCCGGCTGGAGCGACGCAAGTTGGCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCGACTCGGGTTGCGGAGGCGCGGGGCGACTGGGCTTCGCAAGCTTCGACGACCGGTGCACGGCTTGTAATGGCGTGGCTGATCGAGCAGCTGGCGACGCGGCTGA
TCTCGTGGCGGCAGCTGGCGGAAGAAATCCGGCTGGAGCGACGCAAGTTGGCTTCTGA
Protein sequenceShow/hide protein sequence
MCDSGCGGAGRLGFASFDDRCTACNGVADRAAGDAADLVAAAGGRNPAGATQVGF