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IVF0003487 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003487
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr04:16047977..16048420
RNA-Seq ExpressionIVF0003487
SyntenyIVF0003487
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019557 - Aminotransferase-like, plant mobile domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]5.57e-8486.39Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L IR+DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F   SL+AAGTIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEG SIYFG+YEARELIHNGARIQWH +L
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

KAA0047546.1 hypothetical protein E6C27_scaffold2963G00230 [Cucumis melo var. makuwa]1.04e-8286.39Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L I++DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F  ASL+AA TIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEGGSIYFG+YEARELIHN ARIQWH NL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]1.42e-8287.07Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L IR+DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F  ASL+AAGTIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLP +VRGPKMTNFSGEGGSIYFG+YEARELIHNG RIQWH NL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]1.16e-8485.71Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L IR+DLKDETYLAAFLSCWLCLFVF +KGSFLR  +F  ASL+ AGTIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLP +VRGPKMTNFSGEGGSIYFGKYEA ELIHNGARIQWH NL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]4.56e-8388.03Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L IR+DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F  ASL+AAGTIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLA+YF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQ
        THYPLPT+VR PKMTNFSGEGGSIYFGKYEARELIHNGARIQ
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQ

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein1.5e-6986.39Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L I++DLKDETYLAAFLSCWLCLF+F QKGSFLR G+F  ASL+AA TIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEGGSIYFG+YEARELIHNGARIQWH NL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

A0A5A7SQC9 PMD domain-containing protein4.4e-6986.39Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L IR+DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F   SL+AAGTIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEG SIYFG+YEARELIHNGARIQWH +L
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

A0A5A7UGW6 PMD domain-containing protein6.8e-7087.07Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L IR+DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F  ASL+AAGTIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLP +VRGPKMTNFSGEGGSIYFG+YEARELIHNG RIQWH NL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

A0A5A7V4F4 PMD domain-containing protein1.5e-6987.07Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L I++DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F  ASL+AAGTIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF M+YV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEG SIYFG+YEARELIHNGARIQWHTNL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

A0A5A7VHW8 PMD domain-containing protein3.4e-6985.71Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L I++DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F  ASL+ AGTIY+LAVPVLANIYHGLGLITKASNP GR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEGGSIYFG+YEAR+LIHNGARIQWH NL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTTGCGAAACTTGAAATCAGGAACGATCTGAAGGATGAAACGTATTTAGCTGCCTTCTTATCTTGCTGGTTATGCCTTTTTGTATTTCTACAGAAAGGATCATT
TCTTCGCACCGGAATATTTATGACTGCAAGCTTAATAGCTGCTGGCACTATTTATAATCTTGCGGTTCCAGTTTTGGCGAACATATATCATGGGCTAGGTTTGATAACCA
AAGCCTCTAATCCGATAGGACGCATAGACTTTCACTTTTCCATGCATTACGTCTATGGCTGGTTAGCCCATTATTTTGACACGCATTATCCACTTCCCACAAAAGTTCGA
GGCCCCAAGATGACTAACTTTTCTGGCGAAGGCGGATCTATTTATTTTGGCAAATATGAGGCTCGAGAACTGATCCATAATGGTGCAAGAATTCAGTGGCACACTAACCT
CTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTATTTGCGAAACTTGAAATCAGGAACGATCTGAAGGATGAAACGTATTTAGCTGCCTTCTTATCTTGCTGGTTATGCCTTTTTGTATTTCTACAGAAAGGATCATT
TCTTCGCACCGGAATATTTATGACTGCAAGCTTAATAGCTGCTGGCACTATTTATAATCTTGCGGTTCCAGTTTTGGCGAACATATATCATGGGCTAGGTTTGATAACCA
AAGCCTCTAATCCGATAGGACGCATAGACTTTCACTTTTCCATGCATTACGTCTATGGCTGGTTAGCCCATTATTTTGACACGCATTATCCACTTCCCACAAAAGTTCGA
GGCCCCAAGATGACTAACTTTTCTGGCGAAGGCGGATCTATTTATTTTGGCAAATATGAGGCTCGAGAACTGATCCATAATGGTGCAAGAATTCAGTGGCACACTAACCT
CTAG
Protein sequenceShow/hide protein sequence
MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFDTHYPLPTKVR
GPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL