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IVF0003502 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003502
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPol protein
Genome locationchr12:12052448..12052771
RNA-Seq ExpressionIVF0003502
SyntenyIVF0003502
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033194.1 putative transposable element-related protein [Cucumis melo var. makuwa]4.75e-0686.67Show/hide
Query:  PHLHLLFHSVSPSTLPISTSYPANATAVTV
        P+LHL F SVSPS LPISTSYPANATAVTV
Subjt:  PHLHLLFHSVSPSTLPISTSYPANATAVTV
TYK21774.1 pol protein [Cucumis melo var. makuwa]1.88e-1369.81Show/hide
Query:  PFVWPSAALKQSRIVRQAAVGEPPTVMDLRSCKRLCEAKPSRESKPSQTNLQV
        P  WPSAALKQS IVRQAA GEP TVM+LRSCK  CEAKPSRES+P++ + ++
Subjt:  PFVWPSAALKQSRIVRQAAVGEPPTVMDLRSCKRLCEAKPSRESKPSQTNLQV
TrEMBL top hitse value%identityAlignment
A0A5D3DDX8 Pol protein1.2e-1069.81Show/hide
Query:  PFVWPSAALKQSRIVRQAAVGEPPTVMDLRSCKRLCEAKPSRESKPSQTNLQV
        P  WPSAALKQS IVRQAA GEP TVM+LRSCK  CEAKPSRES+P++ + ++
Subjt:  PFVWPSAALKQSRIVRQAAVGEPPTVMDLRSCKRLCEAKPSRESKPSQTNLQV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCACCTTCACCTTCTCTTCCATTCGGTTTCGCCGTCGACCCTCCCAATCTCCACTTCATATCCAGCCAACGCCACCGCTGTCACTGTCAGTTTGTTTTCACCGTT
GTGCATCCCCTTCGTTTGGCCGTCCGCTGCGTTGAAGCAGAGCCGCATCGTTCGCCAAGCAGCCGTCGGTGAGCCTCCAACGGTCATGGATCTCCGGTCTTGCAAGCGCC
TATGTGAAGCCAAGCCGAGCCGTGAATCCAAGCCGAGCCAAACCAATTTGCAAGTCGAGCCGTACCTGAGCCGCAAATCCAAACCGAGCCGAGCCGAGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCACCTTCACCTTCTCTTCCATTCGGTTTCGCCGTCGACCCTCCCAATCTCCACTTCATATCCAGCCAACGCCACCGCTGTCACTGTCAGTTTGTTTTCACCGTT
GTGCATCCCCTTCGTTTGGCCGTCCGCTGCGTTGAAGCAGAGCCGCATCGTTCGCCAAGCAGCCGTCGGTGAGCCTCCAACGGTCATGGATCTCCGGTCTTGCAAGCGCC
TATGTGAAGCCAAGCCGAGCCGTGAATCCAAGCCGAGCCAAACCAATTTGCAAGTCGAGCCGTACCTGAGCCGCAAATCCAAACCGAGCCGAGCCGAGCCATGA
Protein sequenceShow/hide protein sequence
MPHLHLLFHSVSPSTLPISTSYPANATAVTVSLFSPLCIPFVWPSAALKQSRIVRQAAVGEPPTVMDLRSCKRLCEAKPSRESKPSQTNLQVEPYLSRKSKPSRAEP