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IVF0003567 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003567
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:27874136..27874474
RNA-Seq ExpressionIVF0003567
SyntenyIVF0003567
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013721.1 hypothetical protein SDJN02_23888, partial [Cucurbita argyrosperma subsp. argyrosperma]6.69e-1036.7Show/hide
Query:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY
        +F V LH+F PL +A ++ + I  EAD+K S ++ S+IT+  SR FVA   I   FF +Y++D++ +SR+SL +F+  M        SSM I   +  + 
Subjt:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY

Query:  LFLEFKNSS
        + L+F++S+
Subjt:  LFLEFKNSS

XP_008458264.1 PREDICTED: uncharacterized protein LOC103497732 [Cucumis melo]5.98e-74100Show/hide
Query:  MATLFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKG
        MATLFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKG
Subjt:  MATLFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKG

Query:  HNYLFLEFKNS
        HNYLFLEFKNS
Subjt:  HNYLFLEFKNS

XP_022958857.1 uncharacterized protein LOC111460011 [Cucurbita moschata]1.51e-0935.78Show/hide
Query:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY
        +F V LH+F PL +A ++ + I  EAD+K S ++ S+IT+  S  FVA   I   FF +Y++D++ +SR+SL +F+  M        SSM I   +  + 
Subjt:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY

Query:  LFLEFKNSS
        + L+F++S+
Subjt:  LFLEFKNSS

XP_023006010.1 uncharacterized protein LOC111498887 [Cucurbita maxima]1.09e-0937.61Show/hide
Query:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY
        +F V LH+F PL +A +L + I  EAD+K S ++ S+IT+  SR FVA   I   FF +Y +D++ +SR+SL +F+  M        SSM I   +  + 
Subjt:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY

Query:  LFLEFKNSS
        + L+F++S+
Subjt:  LFLEFKNSS

XP_023548334.1 uncharacterized protein LOC111807002 [Cucurbita pepo subsp. pepo]7.82e-1035.78Show/hide
Query:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY
        +F V LH+F PL +A ++ + I +EAD+K S ++ S+IT+  S  FVA   I   FF +Y++D++ +SR+SL +F+  M        SSM I   +  + 
Subjt:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY

Query:  LFLEFKNSS
        + L+F++S+
Subjt:  LFLEFKNSS

TrEMBL top hitse value%identityAlignment
A0A0A0KB79 Uncharacterized protein3.7e-3166.07Show/hide
Query:  ATLFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKD-ITSRISLPTFHCHMNRARKDHCSSMNIRMQKG
        ATLFFVS+ NF+PLADAAAL +NI +EADV++SRTQ S+I    S WFVA LHIWEPFF +YYID+D ITSRISLP  H  +NRAR    SSM +R+QK 
Subjt:  ATLFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKD-ITSRISLPTFHCHMNRARKDHCSSMNIRMQKG

Query:  HNYLFLEFKNSS
         N+LF EF NSS
Subjt:  HNYLFLEFKNSS

A0A1S3C7K5 uncharacterized protein LOC1034977323.9e-57100Show/hide
Query:  MATLFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKG
        MATLFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKG
Subjt:  MATLFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKG

Query:  HNYLFLEFKNS
        HNYLFLEFKNS
Subjt:  HNYLFLEFKNS

A0A6J1H2Z8 uncharacterized protein LOC1114600117.4e-0835.78Show/hide
Query:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY
        +F V LH+F PL +A ++ + I  EAD+K S ++ S+IT+  S  FVA   I   FF +Y++D++ +SR+SL +F+  M        SSM I   +  + 
Subjt:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY

Query:  LFLEFKNSS
        + L+F++S+
Subjt:  LFLEFKNSS

A0A6J1KZ05 uncharacterized protein LOC1114988874.3e-0837.61Show/hide
Query:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY
        +F V LH+F PL +A +L + I  EAD+K S ++ S+IT+  SR FVA   I   FF +Y +D++ +SR+SL +F+  M        SSM I   +  + 
Subjt:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY

Query:  LFLEFKNSS
        + L+F++S+
Subjt:  LFLEFKNSS

A0A6J1L3R4 uncharacterized protein LOC1114988862.8e-0734.86Show/hide
Query:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY
        +F V L +  PL+DA  LF+ +  E DVK +    S+  ++ S  F+  L IW+  F +Y +D +   RISLPTF   +     +  SSM   M +  + 
Subjt:  LFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNY

Query:  LFLEFKNSS
        + LEF NS+
Subjt:  LFLEFKNSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCTTGTTCTTTGTCAGCCTTCACAATTTTGCTCCTCTTGCAGACGCAGCCGCTCTGTTTTCTAATATTTTCTATGAAGCCGACGTAAAAGTCTCACGCACACA
GTTGTCGATGATCACCGCAGACCGTTCCCGTTGGTTCGTCGCTGTGCTCCATATTTGGGAACCCTTCTTCAACGACTACTATATCGATAAAGATATCACTTCAAGAATTT
CTCTCCCAACATTCCATTGTCATATGAATAGAGCAAGAAAAGATCATTGTTCTTCAATGAACATCCGTATGCAGAAAGGCCATAACTACCTTTTCCTTGAGTTTAAAAAT
TCAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCTTGTTCTTTGTCAGCCTTCACAATTTTGCTCCTCTTGCAGACGCAGCCGCTCTGTTTTCTAATATTTTCTATGAAGCCGACGTAAAAGTCTCACGCACACA
GTTGTCGATGATCACCGCAGACCGTTCCCGTTGGTTCGTCGCTGTGCTCCATATTTGGGAACCCTTCTTCAACGACTACTATATCGATAAAGATATCACTTCAAGAATTT
CTCTCCCAACATTCCATTGTCATATGAATAGAGCAAGAAAAGATCATTGTTCTTCAATGAACATCCGTATGCAGAAAGGCCATAACTACCTTTTCCTTGAGTTTAAAAAT
TCAAGTTAG
Protein sequenceShow/hide protein sequence
MATLFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFNDYYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNYLFLEFKN
SS