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IVF0003604 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003604
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionFlagellar basal-body rod protein FlgB
Genome locationchr12:7977644..7977946
RNA-Seq ExpressionIVF0003604
SyntenyIVF0003604
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041719.1 hypothetical protein E6C27_scaffold67G00550 [Cucumis melo var. makuwa]2.79e-41100Show/hide
Query:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKE
        MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKE
Subjt:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKE

KAA0062631.1 hypothetical protein E6C27_scaffold79G001420 [Cucumis melo var. makuwa]1.74e-2163.01Show/hide
Query:  PTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPMNDESIGFMMNLPYE
        P KA+P K D E+VHS+ P+SEQAQL S S ++ALP +REVFGTKGWN FSFK KEV M +E+I F+ NL  E
Subjt:  PTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPMNDESIGFMMNLPYE

TYK11051.1 hypothetical protein E5676_scaffold73G00340 [Cucumis melo var. makuwa]1.25e-1949.41Show/hide
Query:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPMNDESIGFMMNL
        M + K+ +QS KKE    A    +DI+IV S+ P+SEQ QL   SH++ALP +  VFGT+GWN F+FKGK +PM D++I  M+ L
Subjt:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPMNDESIGFMMNL

TYK20947.1 hypothetical protein E5676_scaffold284G00950 [Cucumis melo var. makuwa]1.46e-4097.3Show/hide
Query:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPM
        MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKE  M
Subjt:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPM

TYK25880.1 flagellar basal-body rod protein FlgB [Cucumis melo var. makuwa]4.30e-1449.37Show/hide
Query:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPMNDESI
        M  +K+ DQS KK+  + A+ S+ DI+I+  +  L +QAQL S SH+E LP + EVFGT GWN F+  GKE+P+ DE+I
Subjt:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPMNDESI

TrEMBL top hitse value%identityAlignment
A0A5A7TK20 Uncharacterized protein4.7e-3075Show/hide
Query:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKG----KEVPMNDESIGFMMN---LPYERKQQT
        MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKG    KE     E +G + N    P ++++ T
Subjt:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKG----KEVPMNDESIGFMMN---LPYERKQQT

Query:  SKGK
         K K
Subjt:  SKGK

A0A5A7VAE2 Uncharacterized protein1.9e-1555.17Show/hide
Query:  RKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPMNDESIGFMMNLPYERKQQTSKGK
        R  + P KA+P K D E+VHS+ P+SEQAQL S S ++ALP +REVFGTKGWN FSFK KEV M +E+I F+ NL  E   + ++ K
Subjt:  RKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPMNDESIGFMMNLPYERKQQTSKGK

A0A5D3CGX2 Uncharacterized protein2.3e-1349.41Show/hide
Query:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPMNDESIGFMMNL
        M + K+ +QS KKE    A    +DI+IV S+ P+SEQ QL   SH++ALP +  VFGT+GWN F+FKGK +PM D++I  M+ L
Subjt:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPMNDESIGFMMNL

A0A5D3DBE2 Uncharacterized protein1.6e-3097.3Show/hide
Query:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPM
        MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKE  M
Subjt:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPM

A0A5D3DRG2 Flagellar basal-body rod protein FlgB4.6e-0949.37Show/hide
Query:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPMNDESI
        M  +K+ DQS KK+  + A+ S+ DI+I+  +  L +QAQL S SH+E LP + EVFGT GWN F+  GKE+P+ DE+I
Subjt:  MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPMNDESI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAGATAAGAGTGATGATCAATCTAGAAAGAAAGAAACACCAACTAAGGCCAGTCCATCCAAAATAGATATTGAAATTGTACATTCTAACGACCCTTTGTCGGA
ACAAGCACAGTTGGATTCCCCATCACACAGCGAAGCTCTACCCGATGCGAGAGAAGTCTTTGGAACAAAGGGATGGAATTCTTTCAGCTTCAAGGGCAAAGAGGTGCCCA
TGAATGATGAAAGCATAGGATTTATGATGAACTTACCTTATGAAAGAAAGCAACAGACGAGCAAAGGCAAAAGAAGAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAAGATAAGAGTGATGATCAATCTAGAAAGAAAGAAACACCAACTAAGGCCAGTCCATCCAAAATAGATATTGAAATTGTACATTCTAACGACCCTTTGTCGGA
ACAAGCACAGTTGGATTCCCCATCACACAGCGAAGCTCTACCCGATGCGAGAGAAGTCTTTGGAACAAAGGGATGGAATTCTTTCAGCTTCAAGGGCAAAGAGGTGCCCA
TGAATGATGAAAGCATAGGATTTATGATGAACTTACCTTATGAAAGAAAGCAACAGACGAGCAAAGGCAAAAGAAGAAGCTAA
Protein sequenceShow/hide protein sequence
MAKDKSDDQSRKKETPTKASPSKIDIEIVHSNDPLSEQAQLDSPSHSEALPDAREVFGTKGWNSFSFKGKEVPMNDESIGFMMNLPYERKQQTSKGKRRS