; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0003614 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003614
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUbiquitin
Genome locationchr07:16903000..16904645
RNA-Seq ExpressionIVF0003614
SyntenyIVF0003614
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0019941 - modification-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0031386 - protein tag (molecular function)
GO:0031625 - ubiquitin protein ligase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ09202.1 60S ribosomal protein L40-1 [Actinidia rufa]3.51e-8599.22Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDT+DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

NP_001295699.1 ubiquitin-60S ribosomal protein L40-like [Jatropha curcas]2.47e-85100Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

PON78031.1 Ribosomal protein [Parasponia andersonii]3.51e-8599.22Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN+QKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

XP_007202754.1 ubiquitin-60S ribosomal protein L40 [Prunus persica]3.51e-8599.22Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKK+K
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

XP_022742755.1 ubiquitin-60S ribosomal protein L40-like [Durio zibethinus]4.52e-85100Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

TrEMBL top hitse value%identityAlignment
A0A1U7X7W2 Ubiquitin3.7e-64100Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

A0A1U8NH30 Ubiquitin3.7e-64100Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

A0A2G9GFM2 Ubiquitin3.7e-64100Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

A0A5D2BB53 Ubiquitin3.7e-64100Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

A0A6J1HY41 Ubiquitin3.7e-64100Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

SwissProt top hitse value%identityAlignment
B9DHA6 Ubiquitin-60S ribosomal protein L40-13.8e-6699.22Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

P0CH34 Ubiquitin-60S ribosomal protein L40-13.8e-6699.22Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

P0CH35 Ubiquitin-60S ribosomal protein L40-23.8e-6699.22Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

P49636 Ubiquitin-60S ribosomal protein L402.3e-6699.22Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCR+KKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

Q42202 Ubiquitin-60S ribosomal protein L40-23.8e-6699.22Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

Arabidopsis top hitse value%identityAlignment
AT1G65350.1 ubiquitin 131.1e-3698.7Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG+
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI

AT2G36170.1 Ubiquitin supergroup;Ribosomal protein L40e2.7e-6799.22Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

AT3G52590.1 ubiquitin extension protein 12.7e-6799.22Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICRKCY
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCY

Query:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK
        ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  ARLHPRAVNCRKKKCGHSNQLRPKKKIK

AT4G02890.1 Ubiquitin family protein1.1e-3698.7Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG+
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI

AT4G05320.2 polyubiquitin 101.1e-3698.7Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG+
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACGATTACGTTGGAAGTTGAGTCCAGCGACACCATCGACAATGTCAAAGCTAAGATCCAGGATAAGGAAGGTATTCC
CCCTGACCAGCAGAGACTTATCTTTGCCGGGAAGCAGCTCGAGGATGGGCGAACGCTCGCTGACTACAATATCCAGAAAGAGTCGACACTACACCTGGTGCTCAGGCTTC
GTGGTGGTATTATTGAGCCGTCTTTGATGGCATTGGCTAGGAAGTACAATCAGGACAAGATGATCTGCCGCAAGTGCTATGCCCGCCTGCACCCTCGTGCTGTCAACTGC
AGGAAAAAGAAGTGTGGACACAGCAACCAGTTGAGGCCAAAGAAGAAGATCAAGTAG
mRNA sequenceShow/hide mRNA sequence
CTAATTCAAGAGCATATAAAATGGGGCTCATCGACCAAGCCGAATTGTAAAGCAGAGAGAGCATTAACGAGCGGCGCCCCAAGATGCAGATTTTCGTGAAAACCCTAACG
GGGAAGACGATTACGTTGGAAGTTGAGTCCAGCGACACCATCGACAATGTCAAAGCTAAGATCCAGGATAAGGAAGGTATTCCCCCTGACCAGCAGAGACTTATCTTTGC
CGGGAAGCAGCTCGAGGATGGGCGAACGCTCGCTGACTACAATATCCAGAAAGAGTCGACACTACACCTGGTGCTCAGGCTTCGTGGTGGTATTATTGAGCCGTCTTTGA
TGGCATTGGCTAGGAAGTACAATCAGGACAAGATGATCTGCCGCAAGTGCTATGCCCGCCTGCACCCTCGTGCTGTCAACTGCAGGAAAAAGAAGTGTGGACACAGCAAC
CAGTTGAGGCCAAAGAAGAAGATCAAGTAGACCGTTGATTTTGATCAGAGAGTATGCAAAAGTCTATGCTTTGATTTATTTTCAGGATTGCTTATGCTTAGAGCCATTTG
GCTTATACTCATTAGGAGTTTGAACTGTTATGTTTTTTGCTTTTTAACATTCTCGAGAAACGGCATGTTTTGTTGTTGAACTGAGTACGAAATTTTCAGCTTCTTATTTC
CC
Protein sequenceShow/hide protein sequence
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNC
RKKKCGHSNQLRPKKKIK