; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0003617 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003617
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr08:30006918..30008348
RNA-Seq ExpressionIVF0003617
SyntenyIVF0003617
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035090.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.08e-26280.97Show/hide
Query:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ
        TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI Q
Subjt:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ

Query:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------
        QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW                                                       
Subjt:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------

Query:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
                                         DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Subjt:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ

Query:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
        ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
Subjt:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY

Query:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
        IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
Subjt:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS

KAA0053246.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.04e-26880.97Show/hide
Query:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ
        TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI Q
Subjt:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ

Query:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------
        QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW                                                       
Subjt:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------

Query:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
                                         DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Subjt:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ

Query:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
        ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
Subjt:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY

Query:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
        IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
Subjt:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS

KAA0059912.1 reverse transcriptase [Cucumis melo var. makuwa]1.56e-26580.97Show/hide
Query:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ
        TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI Q
Subjt:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ

Query:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------
        QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW                                                       
Subjt:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------

Query:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
                                         DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Subjt:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ

Query:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
        ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
Subjt:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY

Query:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
        IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
Subjt:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS

KAA0063131.1 reverse transcriptase [Cucumis melo var. makuwa]5.19e-26480.97Show/hide
Query:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ
        TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI Q
Subjt:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ

Query:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------
        QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW                                                       
Subjt:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------

Query:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
                                         DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Subjt:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ

Query:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
        ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
Subjt:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY

Query:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
        IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
Subjt:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS

TYK11053.1 reverse transcriptase [Cucumis melo var. makuwa]1.20e-26480.55Show/hide
Query:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ
        TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI Q
Subjt:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ

Query:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------
        QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW                                                       
Subjt:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------

Query:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
                                         DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Subjt:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ

Query:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
        ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
Subjt:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY

Query:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
        IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAE+ATW+PEYQMKKSYPILFS
Subjt:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS

TrEMBL top hitse value%identityAlignment
A0A5A7U2V7 Reverse transcriptase1.6e-21480.97Show/hide
Query:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ
        TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI Q
Subjt:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ

Query:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------
        QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW                                                       
Subjt:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------

Query:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
                                         DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Subjt:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ

Query:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
        ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
Subjt:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY

Query:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
        IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
Subjt:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS

A0A5A7UUL6 Reverse transcriptase1.6e-21480.97Show/hide
Query:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ
        TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI Q
Subjt:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ

Query:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------
        QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW                                                       
Subjt:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------

Query:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
                                         DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Subjt:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ

Query:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
        ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
Subjt:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY

Query:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
        IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
Subjt:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS

A0A5A7VQD2 Putative Gag-pol protein9.2e-21584.86Show/hide
Query:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ
        TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI Q
Subjt:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ

Query:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDG-------------------------------IW------------------------
        QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHD                                 W                        
Subjt:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDG-------------------------------IW------------------------

Query:  ---------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA
                 DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA
Subjt:  ---------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA

Query:  DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEE
        DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEE
Subjt:  DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEE

Query:  PVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
        PVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
Subjt:  PVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS

A0A5D3BHI1 Reverse transcriptase1.6e-21480.97Show/hide
Query:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ
        TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI Q
Subjt:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ

Query:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------
        QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW                                                       
Subjt:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------

Query:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
                                         DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Subjt:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ

Query:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
        ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
Subjt:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY

Query:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
        IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
Subjt:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS

A0A5D3BS67 Reverse transcriptase1.6e-21480.97Show/hide
Query:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ
        TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI Q
Subjt:  TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQ

Query:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------
        QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW                                                       
Subjt:  QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW-------------------------------------------------------

Query:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
                                         DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Subjt:  ---------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ

Query:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
        ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY
Subjt:  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKY

Query:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
        IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
Subjt:  IPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.6e-2221.78Show/hide
Query:  QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIF
        + ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   I+++ H     +HPG   +   + + + W G++++I EYV  C   
Subjt:  QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIF

Query:  QQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW------------------------------------------------------
        Q  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++                                                      
Subjt:  QQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW------------------------------------------------------

Query:  ----------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL
                                           +LR        +W  H+ L++ +YNN   S+  M P+E ++   P  +P+      ++     E 
Subjt:  ----------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL

Query:  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSM
         Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +   +  KL+P + GP+ + ++ GP  Y L+LP  +  +    FHVS 
Subjt:  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSM

Query:  LRKY
        L KY
Subjt:  LRKY

P0CT35 Transposon Tf2-2 polyprotein3.6e-2221.78Show/hide
Query:  QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIF
        + ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   I+++ H     +HPG   +   + + + W G++++I EYV  C   
Subjt:  QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIF

Query:  QQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW------------------------------------------------------
        Q  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++                                                      
Subjt:  QQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW------------------------------------------------------

Query:  ----------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL
                                           +LR        +W  H+ L++ +YNN   S+  M P+E ++   P  +P+      ++     E 
Subjt:  ----------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL

Query:  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSM
         Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +   +  KL+P + GP+ + ++ GP  Y L+LP  +  +    FHVS 
Subjt:  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSM

Query:  LRKY
        L KY
Subjt:  LRKY

P0CT36 Transposon Tf2-3 polyprotein3.6e-2221.78Show/hide
Query:  QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIF
        + ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   I+++ H     +HPG   +   + + + W G++++I EYV  C   
Subjt:  QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIF

Query:  QQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW------------------------------------------------------
        Q  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++                                                      
Subjt:  QQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW------------------------------------------------------

Query:  ----------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL
                                           +LR        +W  H+ L++ +YNN   S+  M P+E ++   P  +P+      ++     E 
Subjt:  ----------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL

Query:  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSM
         Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +   +  KL+P + GP+ + ++ GP  Y L+LP  +  +    FHVS 
Subjt:  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSM

Query:  LRKY
        L KY
Subjt:  LRKY

P0CT41 Transposon Tf2-12 polyprotein3.6e-2221.78Show/hide
Query:  QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIF
        + ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   I+++ H     +HPG   +   + + + W G++++I EYV  C   
Subjt:  QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIF

Query:  QQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW------------------------------------------------------
        Q  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++                                                      
Subjt:  QQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW------------------------------------------------------

Query:  ----------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL
                                           +LR        +W  H+ L++ +YNN   S+  M P+E ++   P  +P+      ++     E 
Subjt:  ----------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL

Query:  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSM
         Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +   +  KL+P + GP+ + ++ GP  Y L+LP  +  +    FHVS 
Subjt:  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSM

Query:  LRKY
        L KY
Subjt:  LRKY

Q9UR07 Transposon Tf2-11 polyprotein3.6e-2221.78Show/hide
Query:  QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIF
        + ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   I+++ H     +HPG   +   + + + W G++++I EYV  C   
Subjt:  QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIF

Query:  QQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW------------------------------------------------------
        Q  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++                                                      
Subjt:  QQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIW------------------------------------------------------

Query:  ----------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL
                                           +LR        +W  H+ L++ +YNN   S+  M P+E ++   P  +P+      ++     E 
Subjt:  ----------------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL

Query:  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSM
         Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +   +  KL+P + GP+ + ++ GP  Y L+LP  +  +    FHVS 
Subjt:  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSM

Query:  LRKY
        L KY
Subjt:  LRKY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAACTGAGATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTAAGCTGAGAACAGATGG
AGCCATTGTTAAACAAGGAAGATTATGTGTTCCGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGTAGCACCA
AGATGTACAGAACTTTAAAGAAGACTTATTGGTGGTCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTTTCAACAGGTTAAACCAGTAAGACAG
AGGCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAATGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTAT
ATGGGACATGTTGAGAGCATGTGTCCTACAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGTATCGGTATGG
CACCATATGAAGCCTTATACGGGAGACCATGCAGAACTCCTGTGTGCTGGAATGAAGTGGGAGAGCGGAAGTTAGTAGGTCCTGAGTTGGTTCAGATTACGACAAACAAT
ATTAAGTTGATCAGAGAAAATTTGAGGAAAGCCCAAGATCGACAGAAAAGTTATGCGGATAAACGACGAAGAAACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAA
ATTATCTCCATGGCGAGGTGTTATTCGTTTCGGAAGAAAAGGTAAGTTAAGTCCTAGATATATTGGGCCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGAC
TTGAGTTGCCAATAGAACTTGCACGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATCGCATGTGTTGCAAGATCAACCAGTTGAATTA
AAAGAAGATTTGAGTTATGTTGAAGAACCAGTTCAGATTCTCGACAGAAAGGAACAAGTTTTGAGAAACAAAACGATTCCACTCATAAAAGTTTTGTGGAGACATCATGG
AGCGGAGGAGGCAACTTGGGAACCAGAATATCAGATGAAGAAGAGCTATCCGATACTTTTCAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAAACTGAGATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTAAGCTGAGAACAGATGG
AGCCATTGTTAAACAAGGAAGATTATGTGTTCCGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGTAGCACCA
AGATGTACAGAACTTTAAAGAAGACTTATTGGTGGTCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTTTCAACAGGTTAAACCAGTAAGACAG
AGGCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAATGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTAT
ATGGGACATGTTGAGAGCATGTGTCCTACAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGTATCGGTATGG
CACCATATGAAGCCTTATACGGGAGACCATGCAGAACTCCTGTGTGCTGGAATGAAGTGGGAGAGCGGAAGTTAGTAGGTCCTGAGTTGGTTCAGATTACGACAAACAAT
ATTAAGTTGATCAGAGAAAATTTGAGGAAAGCCCAAGATCGACAGAAAAGTTATGCGGATAAACGACGAAGAAACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAA
ATTATCTCCATGGCGAGGTGTTATTCGTTTCGGAAGAAAAGGTAAGTTAAGTCCTAGATATATTGGGCCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGAC
TTGAGTTGCCAATAGAACTTGCACGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATCGCATGTGTTGCAAGATCAACCAGTTGAATTA
AAAGAAGATTTGAGTTATGTTGAAGAACCAGTTCAGATTCTCGACAGAAAGGAACAAGTTTTGAGAAACAAAACGATTCCACTCATAAAAGTTTTGTGGAGACATCATGG
AGCGGAGGAGGCAACTTGGGAACCAGAATATCAGATGAAGAAGAGCTATCCGATACTTTTCAGTTAA
Protein sequenceShow/hide protein sequence
MEQTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQ
RPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNN
IKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVEL
KEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS