; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0003625 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003625
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranslation initiation factor IF-3
Genome locationchr05:22157741..22160925
RNA-Seq ExpressionIVF0003625
SyntenyIVF0003625
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019813 - Translation initiation factor 3, conserved site
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144726.1 translation initiation factor IF3-4, chloroplastic [Cucumis sativus]3.44e-17893.02Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAA---PTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGP
        MAGLSGSFPFKSLLSQSSAA+TTTS ++A   PTSSSSTTPFRTS PSLPISSS  NSNAFK RLHKSNSLRL+FS PVSSPIRTSVFARLGGAPRSSGP
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAA---PTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGP

Query:  PDSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGY
        PDSKRSNDE GLD+SAI+S NVRLIDA+QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGY
Subjt:  PDSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGY

Query:  NIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAG
        NIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA 
Subjt:  NIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAG

Query:  V
        V
Subjt:  V

XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]8.81e-19299.33Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS
        MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSS  NSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS

Query:  KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID
        KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID
Subjt:  KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID

Query:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
Subjt:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]1.39e-15986Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTT--PFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPP
        MAGL+  FPFK LLSQSSA   TTS AAA +SSS+    PFRTS   LP+SSS   SNAF  RLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP 
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTT--PFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPP

Query:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        DSKRS+D+FGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
Subjt:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        IDQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_023547209.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita pepo subsp. pepo]1.33e-14780.94Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS
        MAGLSG FPFKS+ SQSSA +T T+     +SSSS TPFRTS   LP+ SS   SNAF+ RLH SNSLRLV     SSPIRTSVFAR GGAPRSSGP  S
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS

Query:  KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID
        KRS D   LDVS+IRSNNVRLID QQNMVG+V K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY ID
Subjt:  KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID

Query:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPA-VNEVSAGV
        QHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKPA VNEVSA V
Subjt:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPA-VNEVSAGV

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]2.89e-16989.97Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS
        MAGLSG FPFK LLSQS+ A+TT+  AAA TSSSS TPFRTS   LP+SSS   +NAFK RL KSNSLRLV SFPVSSPIRTSVF+R GGAPRSSGP DS
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS

Query:  KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID
        KRS+DEFGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID
Subjt:  KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID

Query:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAGV
        QHDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKDKPAVNEVSAGV
Subjt:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAGV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-36.3e-13993.02Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAA---PTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGP
        MAGLSGSFPFKSLLSQSSAA+TTTS ++A   PTSSSSTTPFRTS PSLPI  SSSNSNAFK RLHKSNSLRL+FS PVSSPIRTSVFARLGGAPRSSGP
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAA---PTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGP

Query:  PDSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGY
        PDSKRSNDE GLD+SAI+S NVRLIDA+QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGY
Subjt:  PDSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGY

Query:  NIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAG
        NIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA 
Subjt:  NIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAG

Query:  V
        V
Subjt:  V

A0A1S3BV82 Translation initiation factor IF-33.9e-14999.33Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS
        MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPI SSS NSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS

Query:  KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID
        KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID
Subjt:  KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID

Query:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
Subjt:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A6J1DYM5 Translation initiation factor IF-31.2e-12486Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTT--PFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPP
        MAGL+  FPFK LLSQSSA   TTS AAA +SSS+    PFRTS   LP+  SSS SNAF  RLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP 
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTT--PFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPP

Query:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        DSKRS+D+FGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
Subjt:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        IDQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A6J1G3Y5 Translation initiation factor IF-33.7e-11580.94Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS
        MAGLSG FPFKS+ SQSSA +T T+     +SSSS TPFRTS   LP+   SS SNAF+ RLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  S
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS

Query:  KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID
        KRS D   LDVS+IRSNNVRLID QQNMVG+V K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY ID
Subjt:  KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID

Query:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV
        QHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVNEVSA V
Subjt:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV

A0A6J1KDY9 Translation initiation factor IF-34.9e-11580.6Show/hide
Query:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS
        MAGLSG FPFKS+ SQSSA +T T+     +SSSS TPFRTS    P+   SS SNA + RLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  S
Subjt:  MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDS

Query:  KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID
        KRS D   LDVS+IRSNNVRLID QQNMVG+V K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY ID
Subjt:  KRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID

Query:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV
        QHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVNEVSAGV
Subjt:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV

SwissProt top hitse value%identityAlignment
B0JKQ1 Translation initiation factor IF-39.4e-3140.91Show/hide
Query:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        D +R+  +       IR   +R+ID+  + +G+++ A+A+++AE+ ELDLV++S  A PPV RIMDY KY++E +KK R  +KK      D+KE+KM Y 
Subjt:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK
        ID+HDY+VR+  A++FLK GDKVK  +  +GRE +  N+A EL+ R  +++ ++A  ++A     RN+ ++L P K
Subjt:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic5.8e-7360.95Show/hide
Query:  SSSTTPFRTSTPSL--PISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EFGLDVSAIRSNNVRLID
        +SST  F      +   +SS S  S   KL   + +   L F+    SP R    T  F   GG  R SG     R  +   +  LD+S+IRS  VRLID
Subjt:  SSSTTPFRTSTPSL--PISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EFGLDVSAIRSNNVRLID

Query:  AQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKV
         QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKV
Subjt:  AQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKV

Query:  IVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA
        IV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SA
Subjt:  IVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA

Q8R9C2 Translation initiation factor IF-31.2e-3043.48Show/hide
Query:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK
        IR   VRLID     +G++S  +A ++A++  LDLV + P+A+PPV ++MD+ KYRYEL K+++  +KK     +++KE++M  NI+ HD+ V+LK+A K
Subjt:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK

Query:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK
        FLKDGDKVKV +  +GRE    ++A +L++RF EE+ E    E+A +   RN+ +V+ P K
Subjt:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK

Q8YNE3 Translation initiation factor IF-34.6e-3044.79Show/hide
Query:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK
        IR   +R+ID   + +G+++  +A+Q+AE+ ELDLV+LS  ADPPV RIMDY KY++E +KK R  +KK      D+KE+KM Y I++HDY+VR+K A++
Subjt:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK

Query:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEVGELATEEAKNFRDRNIFIVLVPNK
        FLKDGDKVK  V  +GRE +  ++A +L++R     E  GE+  ++A     RN+ +++ P K
Subjt:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEVGELATEEAKNFRDRNIFIVLVPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic1.0e-7773.24Show/hide
Query:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K+ QQKK+ 
Subjt:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
         TRMDLKELKMGYNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  KKKDKPAVNEVSA
        KKK KPA ++VSA
Subjt:  KKKDKPAVNEVSA

Arabidopsis top hitse value%identityAlignment
AT1G34360.1 translation initiation factor 3 (IF-3) family protein6.7e-0830.68Show/hide
Query:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA
        I  + VRL+  + +   VVS  +A++ A++ + DLV +  DA PPV +I+ Y+   Y+  K  K+R + K++ A R D+KE++    I+  D   +   A
Subjt:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA

Query:  KKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK
         K ++ G +VK + V  K +  E      +EL+ RF   +G+ A  E+    DR   +V+V +         PPKK
Subjt:  KKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK

AT2G24060.1 Translation initiation factor 3 protein4.1e-7460.95Show/hide
Query:  SSSTTPFRTSTPSL--PISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EFGLDVSAIRSNNVRLID
        +SST  F      +   +SS S  S   KL   + +   L F+    SP R    T  F   GG  R SG     R  +   +  LD+S+IRS  VRLID
Subjt:  SSSTTPFRTSTPSL--PISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EFGLDVSAIRSNNVRLID

Query:  AQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKV
         QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKV
Subjt:  AQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKV

Query:  IVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA
        IV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SA
Subjt:  IVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA

AT4G30690.1 Translation initiation factor 3 protein7.2e-7973.24Show/hide
Query:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K+ QQKK+ 
Subjt:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
         TRMDLKELKMGYNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  KKKDKPAVNEVSA
        KKK KPA ++VSA
Subjt:  KKKDKPAVNEVSA

AT4G30690.2 Translation initiation factor 3 protein7.3e-6362.44Show/hide
Query:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+                  
Subjt:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
                    YNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  KKKDKPAVNEVSA
        KKK KPA ++VSA
Subjt:  KKKDKPAVNEVSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTCTTATCCCAATCCTCCGCCGCTTCCACCACCACCTCCCCCGCCGCTGCCCCAACTTCCTCCTCTTCCACTAC
TCCCTTCCGAACCTCAACTCCCTCTCTTCCCATCTCCTCCTCCTCCTCTAATTCCAATGCCTTCAAACTCCGCCTTCACAAATCCAACTCTCTACGTCTCGTCTTTTCCT
TTCCCGTTTCCTCTCCGATTCGTACTTCTGTATTCGCTCGACTCGGCGGCGCTCCTCGATCTTCAGGACCGCCTGATTCTAAGCGCTCTAACGATGAATTTGGTCTCGAT
GTTTCCGCCATCAGGTCAAATAATGTGAGGCTTATCGATGCTCAACAGAATATGGTTGGAGTTGTGTCGAAGGCCCAGGCCATTCAGATGGCTGAAGACGCTGAACTTGA
TTTGGTTGTATTATCTCCTGATGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTG
CTGCAACTCGCATGGATTTGAAAGAGCTTAAAATGGGTTACAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAAGAAATTTTTAAAAGATGGAGACAAG
GTTAAAGTTATAGTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACCGAAGAGGC
CAAAAACTTCAGAGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCTCAAGAACCTCCCAAGAAAAAAGATAAACCTGCAGTTAATGAAG
TTTCTGCTGGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
CTTGGACTTTGAGTTGTATTTATTTGGTTTCTAAACTTTTTTAAGTATTAAAAGTGTAAGTAACCTCAATAATTAAATATCGATTTAAAGTTGCGAAGTGAGGAATTTAG
TAATATTAACATGTATTTAACATGTATTTCGTGTTCTGAGTGTTGAAGGTTAAATCTTCCACCTAATGGTCGTAATTAGAGAAGTCTTGGGGAAAAGTTTAAAAAGAAAA
CTGAAATAAAGAAGCAGTATCTAAGATCTTCCAATGAGAAGAGAAATAATAGAGTCTGAGTGATGAGTTTACTCCAAGATTCAAACCATTGTGGATAAGATTTCTTTTTT
CTTAAAAAATAATTTAAAAAAAAAATCCCCAAGCTCCCACCCACCACTGCCCCCTTCCACAGCTCAAAGCTATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTC
TTATCCCAATCCTCCGCCGCTTCCACCACCACCTCCCCCGCCGCTGCCCCAACTTCCTCCTCTTCCACTACTCCCTTCCGAACCTCAACTCCCTCTCTTCCCATCTCCTC
CTCCTCCTCTAATTCCAATGCCTTCAAACTCCGCCTTCACAAATCCAACTCTCTACGTCTCGTCTTTTCCTTTCCCGTTTCCTCTCCGATTCGTACTTCTGTATTCGCTC
GACTCGGCGGCGCTCCTCGATCTTCAGGACCGCCTGATTCTAAGCGCTCTAACGATGAATTTGGTCTCGATGTTTCCGCCATCAGGTCAAATAATGTGAGGCTTATCGAT
GCTCAACAGAATATGGTTGGAGTTGTGTCGAAGGCCCAGGCCATTCAGATGGCTGAAGACGCTGAACTTGATTTGGTTGTATTATCTCCTGATGCAGATCCTCCAGTTGT
CAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAAGAGCTTAAAATGGGTT
ACAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAAGAAATTTTTAAAAGATGGAGACAAGGTTAAAGTTATAGTGAACCTGAAAGGTCGTGAAAATGAG
TTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACCGAAGAGGCCAAAAACTTCAGAGACAGGAATATATTTATTGTTCTAGT
CCCTAACAAGGCTGTTCTTCAAAAGGCTCAAGAACCTCCCAAGAAAAAAGATAAACCTGCAGTTAATGAAGTTTCTGCTGGTGTTTAAGCTCAGGAATCGTCGAGCTTTC
GCCAAAAATAGATGGGTTAGTTGCAACATTCTAAATCTTCTTCTACCATATAGAAATTTGAGAGTTTAAATGTATAATGTTTTTGTTTAATCTTATGCATCAAACTGTTG
TTCGTCCTATTTTTTTAGTGGAATGTTTAGAAATCAGATGTGTTACTAATTCTTTAGAAAACATCAATTCATATAACCATCCTTTGCTCTGACCATAGTTTTTAGTGCCT
TGGAGGATGGTGTCCTGGTGAGTTGATTTGAACCAATAACTAACAAC
Protein sequenceShow/hide protein sequence
MAGLSGSFPFKSLLSQSSAASTTTSPAAAPTSSSSTTPFRTSTPSLPISSSSSNSNAFKLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEFGLD
VSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDK
VKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV