; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0003642 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003642
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-type domain-containing protein
Genome locationtig00001378:66180..67023
RNA-Seq ExpressionIVF0003642
SyntenyIVF0003642
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052944.1 E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa]9.84e-111100Show/hide
Query:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE
        MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE
Subjt:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE

Query:  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF
        RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF

KAE8649999.1 hypothetical protein Csa_010276, partial [Cucumis sativus]5.74e-9292.36Show/hide
Query:  VFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEE
        VFFFFYNN IGFRSRP RFKQATPLP  GNSSLRP+PTDDCTI+ALSSLEKALEGETCCVCLSSMGNTD DGDKGVG  TSVLPCLHEFHKVCVERWFEE
Subjt:  VFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEE

Query:  CRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF
        CRRTCPICRYSMEGGG  SHEDETNQILTDEMVIWFSSFHTSGF
Subjt:  CRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF

KAG6577791.1 Protein goliath, partial [Cucurbita argyrosperma subsp. sororia]1.07e-7475.84Show/hide
Query:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE
        MVFNK+FFFFYNN IGFR+ PT  KQATPLP   +SSLRPM  DDC + ALSS EKALEGETCCVCLS MGN D    K  G GTSVLPC HEFHK+C++
Subjt:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE

Query:  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF
        RWFEECRRTCPICRYSMEGGG  +HED +N++LTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF

KAG7015830.1 Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma]8.78e-7475.17Show/hide
Query:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE
        MVFNK+FFFFYNN IGFR+ PT  KQATPLP   +SSLRP   DDC + ALSS EKALEGETCCVCLS MGN D    K  G GTSVLPC HEFHK+C++
Subjt:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE

Query:  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF
        RWFEECRRTCPICRYSMEGGG  +HED +N++LTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF

XP_038906276.1 E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida]9.92e-9086.58Show/hide
Query:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE
        MVFNKVFFFFYNNF+GFRSR  R KQATPLPHGGN SLRP+  DDC I+ LSS EKALEGETCCVCLSSMGN DGD DKGVG  TSVLPCLHEFHKVCV+
Subjt:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE

Query:  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF
        RWFEECRRTCPICRYSMEGGG  SHED TNQILTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF

TrEMBL top hitse value%identityAlignment
A0A0A0L4W7 RING-type domain-containing protein1.3e-7391.95Show/hide
Query:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE
        M+FNKVFFFFYNN IGFRSRP RFKQATPLP  GNSSLRP+PTDDCTI+ALSSLEKALEGETCCVCLSSMGNTD DGDKGV  GTSVLPCLHEFHKVCVE
Subjt:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE

Query:  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF
        RWFEECRRTCPICRYSME  GGGSHEDETNQILTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF

A0A5D3CJ45 E3 ubiquitin-protein ligase RNF132.6e-85100Show/hide
Query:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE
        MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE
Subjt:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE

Query:  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF
        RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF

A0A6A1UIA7 Protein preY, mitochondrial5.4e-2254.55Show/hide
Query:  SSLEKALEGE-TCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF
        SS  +  EGE  CCVCLS +           G  T +LPCLHEFHKVCV+RWF  CR+TCP+CR+SM    GG       + LTDEMVIWFSSFH +GF
Subjt:  SSLEKALEGE-TCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF

A0A6J1CW69 E3 ubiquitin-protein ligase SDIR1-like1.7e-4467.32Show/hide
Query:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTI---IALSSLEKALEGE-TCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHK
        MVFN+VFFFFY NFIGFR RP + KQ T LPHGG+S+LR M  D+  I   + LSS  KALEGE  CCVCLSS+           G  TSVLPCLHEFHK
Subjt:  MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTI---IALSSLEKALEGE-TCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHK

Query:  VCVERWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF
        VCV+RWFEE RRTCPICRYSMEG G G+  +   QILTDEMVIWFSSFHTSGF
Subjt:  VCVERWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF

A0A7N2R4T7 RING-type domain-containing protein1.2e-2445.45Show/hide
Query:  MVFNKVFFFFYNNFIG----FRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHK
        MVF K+  F YN+ IG     R++PT F +A  L H        +  D+  +     +E  +EGE CCVCLS +        K        LPCLHEFHK
Subjt:  MVFNKVFFFFYNNFIG----FRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHK

Query:  VCVERWFEE-CRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF
        +CV+RWF   CR+TCP+CR+SM    GG  +  T Q+LTDEMVIWFSSFH +GF
Subjt:  VCVERWFEE-CRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF

SwissProt top hitse value%identityAlignment
F4HZZ4 Receptor homology region, transmembrane domain- and RING domain-containing protein 61.3e-0929.37Show/hide
Query:  FRSRPTRFKQ-ATPLPHGGNSS-------LRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRR
        F  R  R +Q    L HGG          L+ MPT+  T +    LE+     TC +C+          D  VG    +LPC H++H VC++ W   CR 
Subjt:  FRSRPTRFKQ-ATPLPHGGNSS-------LRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRR

Query:  TCPICRYSMEGGGGGSHEDETNQILT
         CP+C+ +   G       ET  +++
Subjt:  TCPICRYSMEGGGGGSHEDETNQILT

F4HZZ5 Receptor homology region, transmembrane domain- and RING domain-containing protein 53.5e-1029.46Show/hide
Query:  LPHGG-------NSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGG
        LPHGG          L+ MPT+    +    LE++    TC +C+          D  VG    +LPC H++H VC++ W   CR  CP+C+ +   G  
Subjt:  LPHGG-------NSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGG

Query:  GSHEDETNQILT
             ET  +++
Subjt:  GSHEDETNQILT

Q5XIL0 E3 ubiquitin-protein ligase RNF1673.9e-0932.98Show/hide
Query:  LRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGGGSHEDETNQ
        L+ +PT D         +K  E + C +CL        DGDK       +LPC H +H  CV+ W  + R+TCPIC+  +  G G   ++E  Q
Subjt:  LRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGGGSHEDETNQ

Q91XF4 E3 ubiquitin-protein ligase RNF1673.0e-0934.04Show/hide
Query:  LRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGGGSHEDETNQ
        L+ +PT D         +K  E + C +CL        DGDK       VLPC H +H  CV+ W  + R+TCPIC+  +  G G   ++E  Q
Subjt:  LRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGGGSHEDETNQ

Q9H6Y7 E3 ubiquitin-protein ligase RNF1678.6e-0932.98Show/hide
Query:  LRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGGGSHEDETNQ
        L+ +PT D         +K  + + C +CL        DGDK       VLPC H +H  CV+ W  + R+TCPIC+  +  G G   ++E  Q
Subjt:  LRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGGGSHEDETNQ

Arabidopsis top hitse value%identityAlignment
AT1G35625.1 RING/U-box superfamily protein9.4e-1129.37Show/hide
Query:  FRSRPTRFKQ-ATPLPHGGNSS-------LRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRR
        F  R  R +Q    L HGG          L+ MPT+  T +    LE+     TC +C+          D  VG    +LPC H++H VC++ W   CR 
Subjt:  FRSRPTRFKQ-ATPLPHGGNSS-------LRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRR

Query:  TCPICRYSMEGGGGGSHEDETNQILT
         CP+C+ +   G       ET  +++
Subjt:  TCPICRYSMEGGGGGSHEDETNQILT

AT1G35630.1 Protease-associated (PA) RING/U-box zinc finger family protein2.5e-1129.46Show/hide
Query:  LPHGG-------NSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGG
        LPHGG          L+ MPT+    +    LE++    TC +C+          D  VG    +LPC H++H VC++ W   CR  CP+C+ +   G  
Subjt:  LPHGG-------NSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGG

Query:  GSHEDETNQILT
             ET  +++
Subjt:  GSHEDETNQILT

AT3G51325.1 RING/U-box superfamily protein2.2e-1240.91Show/hide
Query:  EGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRR-TCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH
        E E C VCL  M   D             LPC HEFH +CV+ WF   R+  CP+CR+S            T  +LTDE+++WFSSFH
Subjt:  EGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRR-TCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH

AT3G55530.1 RING/U-box superfamily protein3.7e-0728.44Show/hide
Query:  PHGGNSSLRPMPTDDCTIIALSSLEKALEGE----TCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGGGSHE
        P  G S  +   T       L S  ++ +G     TC VCL  +          VG     LPCLH+FH  C++ W  + + TCP+C++      G   +
Subjt:  PHGGNSSLRPMPTDDCTIIALSSLEKALEGE----TCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGGGSHE

Query:  DETNQILTD
        DE +   +D
Subjt:  DETNQILTD

AT5G45290.1 RING/U-box superfamily protein3.3e-0835.06Show/hide
Query:  PMPTD--DCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICR
        P P D  D   I L +  ++ +   C +CL      D             LPC HEFHK CV++W +E  R CP+CR
Subjt:  PMPTD--DCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCATTGGCTTCCGAAGCCGGCCAACAAGATTCAAGCAAGCAACCCCACTTCCCCACGGTGGCAATTCAAG
CCTTCGACCTATGCCAACTGATGATTGTACTATCATAGCTCTTTCGAGTCTCGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCGAGTATGGGAAACACAG
ACGGGGATGGAGACAAGGGGGTTGGCAATGGCACGAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTCGAACGATGGTTCGAAGAGTGTCGTAGAACTTGT
CCGATATGTCGATATTCAATGGAAGGAGGAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCATTTCACACCTC
TGGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
TATCCATCTTCCTCACCAATCCAACCGCTTCTAACCCACGCAAGAATTGCTCTCTTTTTCTCCTCTAATCTCATCTTCCTTTTCATTAAAGAAAAAACATCTCTAGCTAG
CTAATGACTTCCAAATCTCTTCATTGATGACAAATAATGGTTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCATTGGCTTCCGAAGCCGGCCAACAAGATTCAA
GCAAGCAACCCCACTTCCCCACGGTGGCAATTCAAGCCTTCGACCTATGCCAACTGATGATTGTACTATCATAGCTCTTTCGAGTCTCGAGAAGGCGTTGGAGGGCGAGA
CATGTTGCGTGTGCTTGTCGAGTATGGGAAACACAGACGGGGATGGAGACAAGGGGGTTGGCAATGGCACGAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGC
GTCGAACGATGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCAATGGAAGGAGGAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGA
TGAGATGGTGATATGGTTTTCTTCATTTCACACCTCTGGTTTTTGAGCTCATATTTTTGATTTGTTAATTACATCTACTAAAAGCTTTCAAGCTTTTGCAAAAGTGCTTC
CCTTTTTACAAGGTTAAATCTTCATGATTTTGATTTTAATTATGTCATTTTGGATGGCTCTAGCTTCACAAATATCACACTACTGTTGAGAATATATCTTCTTTTCCCAT
TTAAAAATAAAGATAGTTTGTAGAAAAGCAGTGGAACCATTCAAATTTATGTCTAATCTCTAAATGTTGTGGGG
Protein sequenceShow/hide protein sequence
MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTC
PICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF