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IVF0003652 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003652
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionclassical arabinogalactan protein 26
Genome locationchr01:28218914..28219579
RNA-Seq ExpressionIVF0003652
SyntenyIVF0003652
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039346 - Classical arabinogalactan protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575865.1 hypothetical protein SDJN03_26504, partial [Cucurbita argyrosperma subsp. sororia]8.65e-5876.26Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM
        MASIFSLYIPIFMAYTAS  PF+FASYPN+FP     + SSISAAPEFSP+P+PS  SDISPLFPTPG ATLPPSSLPTIPSSPSPPNPDFMD APAPEM
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM

Query:  PLSPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
        PL P+ S+PFSAAA LNS GWC S+++AL  A+ AE+ R
Subjt:  PLSPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
XP_008451434.1 PREDICTED: classical arabinogalactan protein 26 [Cucumis melo]5.03e-87100Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
        MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL

Query:  SPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
        SPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
Subjt:  SPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
XP_011659314.1 classical arabinogalactan protein 26 [Cucumis sativus]7.39e-6884.67Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
        MASIFSLYIPIFMAYTAS FPF+FASYPN FPTH   + SSISAAPEFSP+PAP+SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMD APAPEMPL
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL

Query:  SPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
        SP+ S+PFS AAALNS GWCCSVF+AL T L AEL R
Subjt:  SPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
XP_022953817.1 classical arabinogalactan protein 26 [Cucurbita moschata]2.48e-5775.54Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM
        MASIFSLYIPIFMAYTAS  PF+FASYPN+FP     + SSISAAPEFSP+P+PS  SDI+PLFPTPG ATLPPSSLPTIPSSPSPPNPDFMD APAPEM
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM

Query:  PLSPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
        PL P+ S+PFSAAA LNS GWC S+++AL  A+ AE+ R
Subjt:  PLSPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
XP_023548939.1 classical arabinogalactan protein 26-like [Cucurbita pepo subsp. pepo]4.29e-5876.26Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM
        MASIFSLYIPIFMAYTAS FPF+FASYPN+FP     + SSISAAPEFSP+P+PS  SDISPLFPTPG ATLPPSSLPTIPSSPSPPNPDFMD APAPEM
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM

Query:  PLSPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
        PL P+ S+PFSA A LNS GWC S+++AL  A+ AE+ R
Subjt:  PLSPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
TrEMBL top hitse value%identityAlignment
A0A0A0K510 Uncharacterized protein7.8e-5284.67Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
        MASIFSLYIPIFMAYTAS FPF+FASYPN FPTH   + SSISAAPEFSP+PAP+SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMD APAPEMPL
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL

Query:  SPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
        SP+ S+PFS AAALNS GWCCSVF+AL T L AEL R
Subjt:  SPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
A0A1S3BRG9 classical arabinogalactan protein 261.9e-66100Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
        MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL

Query:  SPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
        SPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
Subjt:  SPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
A0A5A7UQZ3 Classical arabinogalactan protein 261.9e-66100Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
        MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPL

Query:  SPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
        SPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
Subjt:  SPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
A0A6J1GPB2 classical arabinogalactan protein 267.8e-4475.54Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM
        MASIFSLYIPIFMAYTAS  PF+FASYPN+FP     + SSISAAPEFSP+P+PS  SDI+PLFPTPG ATLPPSSLPTIPSSPSPPNPDFMD APAPEM
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM

Query:  PLSPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
        PL P+ S+PFSAAA LNS GWC S+++AL  A+ AE+ R
Subjt:  PLSPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
A0A6J1JX46 classical arabinogalactan protein 266.6e-4374.82Show/hide
Query:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM
        MASIFSLYIPIFMAYTAS F F+FASYPN+FP     + SSISAAPEFSP+P+PS  SDISPLFPTPG ATLPPSSLPTIPSSPSPPNPDFMD  PAPEM
Subjt:  MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPS--SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEM

Query:  PLSPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
        PL P+ S+PFSAAA LNS GWC S+++AL  A+  E+ R
Subjt:  PLSPTWSMPFSAAAALNSVGWCCSVFLALMTALAAELHR
SwissProt top hitse value%identityAlignment
Q94F57 Classical arabinogalactan protein 261.1e-0544.44Show/hide
Query:  SSISAAPEFSP---------APAPSSDISPLFPTPGDATLPPSS-----LPTIPSSPSPPNPDFMDVAPAPEMPLSPTWS-MPFSAAAALNSVGWCCSVF
        S+ISAAP F P          PA S D SPLFPTPG + + PS      +PTIPSS SPPNPD   V P P + +SP  S +P S++  L S      + 
Subjt:  SSISAAPEFSP---------APAPSSDISPLFPTPGDATLPPSS-----LPTIPSSPSPPNPDFMDVAPAPEMPLSPTWS-MPFSAAAALNSVGWCCSVF

Query:  LALMTALA
        + LM  LA
Subjt:  LALMTALA
Arabidopsis top hitse value%identityAlignment
AT2G47930.1 arabinogalactan protein 267.6e-0744.44Show/hide
Query:  SSISAAPEFSP---------APAPSSDISPLFPTPGDATLPPSS-----LPTIPSSPSPPNPDFMDVAPAPEMPLSPTWS-MPFSAAAALNSVGWCCSVF
        S+ISAAP F P          PA S D SPLFPTPG + + PS      +PTIPSS SPPNPD   V P P + +SP  S +P S++  L S      + 
Subjt:  SSISAAPEFSP---------APAPSSDISPLFPTPGDATLPPSS-----LPTIPSSPSPPNPDFMDVAPAPEMPLSPTWS-MPFSAAAALNSVGWCCSVF

Query:  LALMTALA
        + LM  LA
Subjt:  LALMTALA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATTTTCTCTCTCTACATTCCCATTTTCATGGCCTACACAGCTTCCTTTTTCCCTTTCGCTTTCGCTTCTTATCCCAATTACTTCCCTACCCACCGGTACCT
CATGACTTCTTCCATCTCCGCCGCCCCCGAATTTTCCCCGGCACCGGCGCCGTCGTCAGACATTTCTCCACTCTTTCCCACTCCCGGCGACGCTACCCTTCCGCCATCCT
CCTTGCCTACCATACCCTCCAGTCCCAGCCCTCCGAACCCTGATTTTATGGACGTTGCGCCGGCGCCGGAGATGCCTCTTTCGCCGACTTGGTCCATGCCATTCTCTGCC
GCTGCTGCTCTTAACTCCGTTGGGTGGTGTTGTTCGGTTTTTCTAGCTCTTATGACGGCTCTCGCTGCAGAGCTCCACCGGTGA
mRNA sequenceShow/hide mRNA sequence
CTTCTTTCTTCTTCCTCTCAATTTCTCTACTTTTTTAGAAATATAAAATCTCTCTCTCTCTCTCTCTCTCTCATCATTGAAAATGGCTTCCATTTTCTCTCTCTACATTC
CCATTTTCATGGCCTACACAGCTTCCTTTTTCCCTTTCGCTTTCGCTTCTTATCCCAATTACTTCCCTACCCACCGGTACCTCATGACTTCTTCCATCTCCGCCGCCCCC
GAATTTTCCCCGGCACCGGCGCCGTCGTCAGACATTTCTCCACTCTTTCCCACTCCCGGCGACGCTACCCTTCCGCCATCCTCCTTGCCTACCATACCCTCCAGTCCCAG
CCCTCCGAACCCTGATTTTATGGACGTTGCGCCGGCGCCGGAGATGCCTCTTTCGCCGACTTGGTCCATGCCATTCTCTGCCGCTGCTGCTCTTAACTCCGTTGGGTGGT
GTTGTTCGGTTTTTCTAGCTCTTATGACGGCTCTCGCTGCAGAGCTCCACCGGTGACGGGTGAGCCGCCGTTGCTCGGATTTTAGTGGACATTGGAGTGTAGTTATGTTT
TATTGATTTGAGTAATTCTCTTGTCTTTTACTTTTGTGTTTTCTTGTTACTATATATATATACACACATATTTATTTAATTTTTGGATTCGAGTCTATTTTATTTTTTCA
ATTCCA
Protein sequenceShow/hide protein sequence
MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPLSPTWSMPFSA
AAALNSVGWCCSVFLALMTALAAELHR