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IVF0003673 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003673
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein RKD2-like isoform X1
Genome locationchr07:1288298..1289444
RNA-Seq ExpressionIVF0003673
SyntenyIVF0003673
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR044607 - Transcription factor RKD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064525.1 protein RKD2-like isoform X1 [Cucumis melo var. makuwa]2.18e-13999.48Show/hide
Query:  MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ
        MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ
Subjt:  MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ

Query:  IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE
        IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMF+
Subjt:  IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE

KAG6608345.1 Protein RKD4, partial [Cucurbita argyrosperma subsp. sororia]8.19e-7064.06Show/hide
Query:  MADSGDGEFPLWKFHQNYPLFTDD-ILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNF
        MADSGD EFPLW FHQN PLFTDD IL+FMA IKPTAAEL+A S A DQ   PP+STSGEA    +++YW+STV   D S+Y+ FPGET         +F
Subjt:  MADSGDGEFPLWKFHQNYPLFTDD-ILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNF

Query:  QIPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE
          PGY  GDGG    G  + Q  I PE +TFQPITCSCCL+LREI+HTNGINTRKLEIHGRFGILWHAIL+E FP    TN S+  QYKMF+
Subjt:  QIPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE

KAG7037698.1 Protein RKD3, partial [Cucurbita argyrosperma subsp. argyrosperma]4.77e-6763.87Show/hide
Query:  MADSGDGEFPLWKFHQNYPLFTDD-ILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNF
        MADSGD EFPLW FHQN PLFTDD IL+FMA IKPTAAEL+A S A DQ   PP+STSGEA    +++YW+STV   D S+Y+ FPGET         +F
Subjt:  MADSGDGEFPLWKFHQNYPLFTDD-ILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNF

Query:  QIPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMF
          PGY  GDGG    G  + Q  I PE +TFQPITCSCCL+LREI+HTNGINTRKLEIHGRFGILWHAIL+E FP    TN S+  QYK+F
Subjt:  QIPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMF

KGN55365.1 hypothetical protein Csa_012027 [Cucumis sativus]1.94e-12389.53Show/hide
Query:  MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ
        MADSGDGEFP W+FH+NYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPT TSGEATSAADV+YWNSTV PS SSNYYFFPGETSRWECQE QNFQ
Subjt:  MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ

Query:  IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE
         PGYY    G D  GVYNMQLPI PESNTFQPI CSCCLVLREI+HTNGINTRKLEIHGRFGILWHAILEENFP LGGTNSSSFTQYKMFE
Subjt:  IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE

TYK20065.1 protein RKD2-like isoform X1 [Cucumis melo var. makuwa]4.77e-13999.48Show/hide
Query:  MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ
        MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ
Subjt:  MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ

Query:  IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE
        IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMF+
Subjt:  IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE

TrEMBL top hitse value%identityAlignment
A0A0A0L065 Uncharacterized protein2.7e-9589.53Show/hide
Query:  MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ
        MADSGDGEFP W+FH+NYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPT TSGEATSAADV+YWNSTV PS SSNYYFFPGETSRWECQE QNFQ
Subjt:  MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ

Query:  IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE
         PGYY    G D  GVYNMQLPI PESNTFQPI CSCCLVLREI+HTNGINTRKLEIHGRFGILWHAILEENFP LGGTNSSSFTQYKMFE
Subjt:  IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE

A0A1S3BCY1 uncharacterized protein LOC103488516 isoform X27.2e-1157.75Show/hide
Query:  LPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE
        LPI P   T  P  CSCC VLRE +HTNG+N+RKLEIHGR G++ HAILE   PI+   N S   QY+MF+
Subjt:  LPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE

A0A5A7V999 Protein RKD2-like isoform X17.2e-1157.75Show/hide
Query:  LPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE
        LPI P   T  P  CSCC VLRE +HTNG+N+RKLEIHGR G++ HAILE   PI+   N S   QY+MF+
Subjt:  LPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE

A0A5A7VF79 Protein RKD2-like isoform X12.0e-10999.48Show/hide
Query:  MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ
        MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ
Subjt:  MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ

Query:  IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE
        IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMF+
Subjt:  IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE

A0A5D3D916 Protein RKD2-like isoform X12.0e-10999.48Show/hide
Query:  MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ
        MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ
Subjt:  MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQ

Query:  IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE
        IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMF+
Subjt:  IPGYYYGDGGDDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATTCAGGGGACGGCGAGTTCCCATTGTGGAAATTCCATCAGAATTACCCTTTATTCACCGACGACATACTCAATTTCATGGCCCAAATCAAGCCCACCGCCGC
TGAATTAATGGCCAAATCCCCCGCTGCAGACCAAAGTTTACTACCACCCACTTCCACTTCCGGTGAAGCCACCTCCGCCGCTGACGTGGATTATTGGAATTCTACTGTGG
GACCCTCCGATAGTAGTAATTACTATTTCTTCCCCGGCGAAACTAGTCGTTGGGAATGTCAAGAACAACAAAATTTTCAAATTCCGGGTTATTACTACGGCGATGGCGGC
GATGACGACCGCGGTGTTTACAATATGCAACTTCCTATTGCGCCTGAGAGTAATACGTTTCAACCTATAACCTGTAGTTGCTGCCTTGTTCTTAGAGAAATCATTCATAC
CAATGGTATCAACACAAGAAAGCTAGAGATCCATGGAAGATTCGGAATATTGTGGCATGCAATTCTAGAAGAAAACTTCCCCATCCTCGGAGGCACCAACTCTTCGAGCT
TCACCCAATACAAAATGTTCGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATTCAGGGGACGGCGAGTTCCCATTGTGGAAATTCCATCAGAATTACCCTTTATTCACCGACGACATACTCAATTTCATGGCCCAAATCAAGCCCACCGCCGC
TGAATTAATGGCCAAATCCCCCGCTGCAGACCAAAGTTTACTACCACCCACTTCCACTTCCGGTGAAGCCACCTCCGCCGCTGACGTGGATTATTGGAATTCTACTGTGG
GACCCTCCGATAGTAGTAATTACTATTTCTTCCCCGGCGAAACTAGTCGTTGGGAATGTCAAGAACAACAAAATTTTCAAATTCCGGGTTATTACTACGGCGATGGCGGC
GATGACGACCGCGGTGTTTACAATATGCAACTTCCTATTGCGCCTGAGAGTAATACGTTTCAACCTATAACCTGTAGTTGCTGCCTTGTTCTTAGAGAAATCATTCATAC
CAATGGTATCAACACAAGAAAGCTAGAGATCCATGGAAGATTCGGAATATTGTGGCATGCAATTCTAGAAGAAAACTTCCCCATCCTCGGAGGCACCAACTCTTCGAGCT
TCACCCAATACAAAATGTTCGAGTAA
Protein sequenceShow/hide protein sequence
MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSLLPPTSTSGEATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQIPGYYYGDGG
DDDRGVYNMQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGGTNSSSFTQYKMFE