; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0003684 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003684
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr12:1484349..1486952
RNA-Seq ExpressionIVF0003684
SyntenyIVF0003684
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044795 - Pentatricopeptide repeat-containing protein THA8L-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653270.1 hypothetical protein Csa_023162 [Cucumis sativus]1.37e-17895.7Show/hide
Query:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV
        MAIRWFSRSKLP+FA VFL+GLTRRPIRDVPLPV STIT FQPDS RPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEK  KFMKSHV
Subjt:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV

Query:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDM+AVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
Subjt:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPQKRYSAYVE
        DMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPQKRYSAYV+
Subjt:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPQKRYSAYVE

TYJ97367.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]4.40e-169100Show/hide
Query:  SKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDM
        SKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDM
Subjt:  SKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDM

Query:  LAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEP
        LAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEP
Subjt:  LAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEP

Query:  PDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
        PDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
Subjt:  PDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

XP_004145279.2 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucumis sativus]7.63e-17995.7Show/hide
Query:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV
        MAIRWFSRSKLP+FA VFL+GLTRRPIRDVPLPV STIT FQPDS RPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEK  KFMKSHV
Subjt:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV

Query:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDM+AVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
Subjt:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPQKRYSAYVE
        DMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPQKRYSAYV+
Subjt:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPQKRYSAYVE

XP_008457435.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Cucumis melo]1.81e-179100Show/hide
Query:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV
        MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV
Subjt:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV

Query:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
Subjt:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
        DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
Subjt:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

XP_038895593.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Benincasa hispida]5.11e-17094.33Show/hide
Query:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV
        MAIRWFSRSKLPIFA VFLRGLTRRPIRD  LPV STITGFQPDSSRP+WGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL KFMKSHV
Subjt:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV

Query:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
         RLLKLDM++VLGELERQEEVALAVKIFRLI+KQDWYKPDV+IYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMN+YE
Subjt:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
        DMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHV+DP
Subjt:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

TrEMBL top hitse value%identityAlignment
A0A0A0LVE9 Uncharacterized protein5.8e-13395.95Show/hide
Query:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV
        MAIRWFSRSKLP+FA VFL+GLTRRPIRDVPLPV STIT FQPDS RPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEK  KFMKSHV
Subjt:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV

Query:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDM+AVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
Subjt:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
        DMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
Subjt:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

A0A1S3C5H5 pentatricopeptide repeat-containing protein At3g468702.1e-138100Show/hide
Query:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV
        MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV
Subjt:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV

Query:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
Subjt:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
        DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
Subjt:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

A0A5A7SRJ7 Pentatricopeptide repeat-containing protein2.1e-138100Show/hide
Query:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV
        MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV
Subjt:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV

Query:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
Subjt:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
        DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
Subjt:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

A0A5D3BE11 Pentatricopeptide repeat-containing protein2.0e-133100Show/hide
Query:  SKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDM
        SKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDM
Subjt:  SKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDM

Query:  LAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEP
        LAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEP
Subjt:  LAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEP

Query:  PDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
        PDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
Subjt:  PDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

A0A6J1E045 pentatricopeptide repeat-containing protein At3g468702.6e-12591.09Show/hide
Query:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV
        MAIR FSRSKLPIFA VFLRGLTRRPIRD+PLPV S ITGFQPDSSRPI GFR YHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL KFMKSHV
Subjt:  MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHV

Query:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDM++VLGELERQEEVALAVKIFRLI+KQDWYKPDV++YKDLIIALA SKKMDDAM+LWESMR+E+LFPDSQTYTEVIRGFLRYGSPSDAMN+YE
Subjt:  SRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
        DMKKSP+PPDELPFRILLKGLLPHPLLRN+VKQDFEELFPDQ+V+DP
Subjt:  DMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623506.3e-4444.63Show/hide
Query:  IGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREE
        + KE L   + LKR +    +L +F+ SHVSRLLK D+++VL E +RQ +V L +K++ ++R++ WY+PD++ Y+D+++ LAR+KK+D+  K+WE +++E
Subjt:  IGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREE

Query:  NLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
         +  D  T+ +++RGFL    P +AM +Y +M++SP+ P  LPFR++LKGL+P+P LR +VK DF ELFP   V+DP
Subjt:  NLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic1.3e-0929.75Show/hide
Query:  RSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWE
        ++ K   ++A+ +I   +  K   EK     K    +LL   +L  L E         A+++F L+R+Q WYKP+V IY  LI+ L + K+ + A +L++
Subjt:  RSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWE

Query:  SMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPE-PPDELPFRILLKGLL
         M  E    + + YT ++  + R G    A  + E MK S    PD   + IL+K  L
Subjt:  SMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPE-PPDELPFRILLKGLL

Q9FMQ1 Pentatricopeptide repeat-containing protein At5g12100, mitochondrial5.1e-0931.54Show/hide
Query:  EVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLK
        +V   +++F  + K D   P V+IY  LI  L + K+M+DA +L++ M    L P   TY  +I G+ + G+P  +  V E MK     P  + F  LLK
Subjt:  EVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLK

Query:  GLLPHPLLRN--RVKQDFEEL--FPDQHVF
        GL    ++ +   V ++ ++L   PD   F
Subjt:  GLLPHPLLRN--RVKQDFEEL--FPDQHVF

Q9LUR2 Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial1.9e-0832.65Show/hide
Query:  AVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKGL
        A ++F L+ +   Y P+  IY  LI    +SK+++D MK++  M ++ +  ++ TYT +I+G+   G P  A  V+  M     PPD   + +LL GL
Subjt:  AVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKGL

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic8.2e-9267.34Show/hide
Query:  AIRWFSRSKLPIFALVFLRGLTRRP-IRDVPLPVTSTITGFQPDSSRPIWGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSH
        AIR  SR K P FA +F + +TR P I  +        T   P   +P   F   +HDGRPRGPLWR +K IGKEALFVI GLKR KED+EKL KF+K+H
Subjt:  AIRWFSRSKLPIFALVFLRGLTRRP-IRDVPLPVTSTITGFQPDSSRPIWGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSH

Query:  VSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVY
        V RLLKLDMLAV+GELERQEE ALA+K+F +I+KQ+WY+PDV++YKDLI++LA+SK+MD+AM LWE M++ENLFPDSQTYTEVIRGFLR G P+DAMNVY
Subjt:  VSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVY

Query:  EDMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
        EDM KSP+PP+ELPFR+LLKGLLPHPLLRN+VK+DFEELFP++H +DP
Subjt:  EDMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein4.5e-4544.63Show/hide
Query:  IGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREE
        + KE L   + LKR +    +L +F+ SHVSRLLK D+++VL E +RQ +V L +K++ ++R++ WY+PD++ Y+D+++ LAR+KK+D+  K+WE +++E
Subjt:  IGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREE

Query:  NLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
         +  D  T+ +++RGFL    P +AM +Y +M++SP+ P  LPFR++LKGL+P+P LR +VK DF ELFP   V+DP
Subjt:  NLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

AT1G77340.1 Pentatricopeptide repeat (PPR) superfamily protein2.8e-1032.04Show/hide
Query:  RQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRI
        R++EV  A K+F+ + +   ++ +V  Y  LI  L  +KK+D+A+ L   M+++N  P+ +TYT +I      G  S+AMN+++ M +S   PD+  + +
Subjt:  RQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRI

Query:  LLK
        L++
Subjt:  LLK

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein5.8e-9367.34Show/hide
Query:  AIRWFSRSKLPIFALVFLRGLTRRP-IRDVPLPVTSTITGFQPDSSRPIWGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSH
        AIR  SR K P FA +F + +TR P I  +        T   P   +P   F   +HDGRPRGPLWR +K IGKEALFVI GLKR KED+EKL KF+K+H
Subjt:  AIRWFSRSKLPIFALVFLRGLTRRP-IRDVPLPVTSTITGFQPDSSRPIWGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSH

Query:  VSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVY
        V RLLKLDMLAV+GELERQEE ALA+K+F +I+KQ+WY+PDV++YKDLI++LA+SK+MD+AM LWE M++ENLFPDSQTYTEVIRGFLR G P+DAMNVY
Subjt:  VSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVY

Query:  EDMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
        EDM KSP+PP+ELPFR+LLKGLLPHPLLRN+VK+DFEELFP++H +DP
Subjt:  EDMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain1.2e-1633.33Show/hide
Query:  RGPLWRSRKAIGKEALFVIQGLKR---------------FKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYK
        R PL R R  +  EA+  +Q LKR                      L + + S   RLLK DM+AVL EL RQ E +LA+K+F  IRK+ WYKP V +Y 
Subjt:  RGPLWRSRKAIGKEALFVIQGLKR---------------FKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYK

Query:  DLIIALARSKKMDDAMKLWESMR-EENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKGL
        D+I  +A +  M++   L+ +M+ E+ L  + + +  ++   L +      M+ Y  M+     PD   FR+L+ GL
Subjt:  DLIIALARSKKMDDAMKLWESMR-EENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKGL

AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein9.5e-1129.75Show/hide
Query:  RSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWE
        ++ K   ++A+ +I   +  K   EK     K    +LL   +L  L E         A+++F L+R+Q WYKP+V IY  LI+ L + K+ + A +L++
Subjt:  RSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWE

Query:  SMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPE-PPDELPFRILLKGLL
         M  E    + + YT ++  + R G    A  + E MK S    PD   + IL+K  L
Subjt:  SMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPE-PPDELPFRILLKGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATTCGGTGGTTTTCCAGGTCGAAATTGCCCATTTTTGCTTTGGTATTCCTACGGGGTTTAACGAGGAGACCAATTAGAGATGTCCCATTACCAGTTACATCGAC
GATTACTGGTTTTCAGCCGGATTCGAGCCGACCCATATGGGGATTCCGGCTGTATCACGACGGGAGGCCTCGGGGACCCCTTTGGAGAAGCCGGAAAGCAATTGGTAAAG
AAGCACTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGATGAAGAGAAACTCGGAAAGTTCATGAAGAGTCATGTTTCAAGGCTCTTGAAATTGGATATGCTTGCT
GTGCTTGGTGAACTTGAGCGGCAGGAGGAGGTTGCTTTAGCTGTCAAGATATTTAGGTTGATTCGGAAGCAAGACTGGTACAAGCCTGATGTTTATATATATAAAGACTT
GATTATTGCATTAGCTAGAAGTAAAAAGATGGATGACGCGATGAAATTATGGGAAAGCATGAGAGAGGAAAATTTATTCCCCGACTCTCAAACGTATACTGAAGTCATCA
GAGGTTTCTTGAGATATGGATCTCCTTCTGATGCAATGAACGTATATGAGGATATGAAGAAGTCTCCAGAGCCACCAGACGAGTTGCCATTTAGAATTTTATTGAAAGGC
CTTTTGCCACACCCCCTTTTGAGAAACAGAGTAAAGCAAGACTTTGAGGAGCTCTTTCCTGACCAGCATGTGTTCGATCCCCAGAAGAGATATTCAGCCTACGTTGAGTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGCAATTCGGTGGTTTTCCAGGTCGAAATTGCCCATTTTTGCTTTGGTATTCCTACGGGGTTTAACGAGGAGACCAATTAGAGATGTCCCATTACCAGTTACATCGAC
GATTACTGGTTTTCAGCCGGATTCGAGCCGACCCATATGGGGATTCCGGCTGTATCACGACGGGAGGCCTCGGGGACCCCTTTGGAGAAGCCGGAAAGCAATTGGTAAAG
AAGCACTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGATGAAGAGAAACTCGGAAAGTTCATGAAGAGTCATGTTTCAAGGCTCTTGAAATTGGATATGCTTGCT
GTGCTTGGTGAACTTGAGCGGCAGGAGGAGGTTGCTTTAGCTGTCAAGATATTTAGGTTGATTCGGAAGCAAGACTGGTACAAGCCTGATGTTTATATATATAAAGACTT
GATTATTGCATTAGCTAGAAGTAAAAAGATGGATGACGCGATGAAATTATGGGAAAGCATGAGAGAGGAAAATTTATTCCCCGACTCTCAAACGTATACTGAAGTCATCA
GAGGTTTCTTGAGATATGGATCTCCTTCTGATGCAATGAACGTATATGAGGATATGAAGAAGTCTCCAGAGCCACCAGACGAGTTGCCATTTAGAATTTTATTGAAAGGC
CTTTTGCCACACCCCCTTTTGAGAAACAGAGTAAAGCAAGACTTTGAGGAGCTCTTTCCTGACCAGCATGTGTTCGATCCCCAGAAGAGATATTCAGCCTACGTTGAGTG
A
Protein sequenceShow/hide protein sequence
MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLA
VLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKG
LLPHPLLRNRVKQDFEELFPDQHVFDPQKRYSAYVE