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IVF0003709 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003709
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr12:10341354..10341545
RNA-Seq ExpressionIVF0003709
SyntenyIVF0003709
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058105.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.87e-0465.52Show/hide
Query:  GGGRKWQRWWREKTVKVDRLVEGENGNDG
        GGGR  +RWW+  T ++DRLVEGEN NDG
Subjt:  GGGRKWQRWWREKTVKVDRLVEGENGNDG
KAA0058345.1 hypothetical protein E6C27_scaffold409G00310 [Cucumis melo var. makuwa]1.87e-1076.74Show/hide
Query:  MAEIGLREMTSAAGNQMRAVDGGGRKWQR---WWREK-TVKVD
        MAEIGLRE TSAA NQ+RAVDGGGRK QR   WWREK T  VD
Subjt:  MAEIGLREMTSAAGNQMRAVDGGGRKWQR---WWREK-TVKVD
KAA0063959.1 gag/pol protein [Cucumis melo var. makuwa]1.91e-0753.85Show/hide
Query:  DGGGRKWQR---WWREKTVKVDRLVEGENGNDGG---------WWREKTAEV
        D GGRK      WWREK   +DR+VEGENG+DGG         WWREKTA +
Subjt:  DGGGRKWQR---WWREKTVKVDRLVEGENGNDGG---------WWREKTAEV
KAA0065564.1 hypothetical protein E6C27_scaffold90G00010 [Cucumis melo var. makuwa]1.07e-0558.33Show/hide
Query:  WWREKTVKVDRLVEGENGNDGG---------WWREK
        WWREKT  +DR+VEGEN +DGG         WWREK
Subjt:  WWREKTVKVDRLVEGENGNDGG---------WWREK
KAA0066345.1 hypothetical protein E6C27_scaffold21G004100 [Cucumis melo var. makuwa]4.27e-0853.85Show/hide
Query:  DGGGRKWQR---WWREKTVKVDRLVEGENGNDGG---------WWREKTAEV
        D GGRK      WWREKT  +D+LVE ENGNDGG         WWREKT  +
Subjt:  DGGGRKWQR---WWREKTVKVDRLVEGENGNDGG---------WWREKTAEV
TrEMBL top hitse value%identityAlignment
A0A5A7UXJ5 Uncharacterized protein6.7e-0662.07Show/hide
Query:  MAEIGLREMTSAAGNQMRAVDGGGRKWQR---WWREK-TVKVDRLVEGENGNDG-GWW
        MAEIGLRE TSAA NQ+RAVDGGGRK QR   WWREK T  VD        ++G  WW
Subjt:  MAEIGLREMTSAAGNQMRAVDGGGRKWQR---WWREK-TVKVDRLVEGENGNDG-GWW
A0A5A7VKQ7 Uncharacterized protein1.6e-0457.14Show/hide
Query:  DGGGRKWQR---WWREKTVKVDRLVEGENGNDG---------GWWREKT
        D GGRK      WWREKT  +D+LVE ENGNDG         GWWREKT
Subjt:  DGGGRKWQR---WWREKTVKVDRLVEGENGNDG---------GWWREKT
A0A5D3C1D1 Gag/pol protein7.4e-0556Show/hide
Query:  DGGGRKWQR---WWREKTVKVDRLVEGENGNDG---------GWWREKTA
        D GGRK      WWREK   +DR+VEGENG+DG         GWWREKTA
Subjt:  DGGGRKWQR---WWREKTVKVDRLVEGENGNDG---------GWWREKTA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGATTGGATTGAGAGAGATGACGTCGGCGGCCGGAAATCAAATGCGAGCGGTGGATGGTGGAGGGAGAAAATGGCAACGATGGTGGAGGGAGAAAACGGTTAA
GGTCGATCGGTTGGTGGAGGGAGAAAACGGCAACGATGGTGGATGGTGGAGGGAGAAAACGGCTGAGGTCGGAGGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGATTGGATTGAGAGAGATGACGTCGGCGGCCGGAAATCAAATGCGAGCGGTGGATGGTGGAGGGAGAAAATGGCAACGATGGTGGAGGGAGAAAACGGTTAA
GGTCGATCGGTTGGTGGAGGGAGAAAACGGCAACGATGGTGGATGGTGGAGGGAGAAAACGGCTGAGGTCGGAGGGCTTTGA
Protein sequenceShow/hide protein sequence
MAEIGLREMTSAAGNQMRAVDGGGRKWQRWWREKTVKVDRLVEGENGNDGGWWREKTAEVGGL