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IVF0003780 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003780
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr09:5310730..5311104
RNA-Seq ExpressionIVF0003780
SyntenyIVF0003780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049602.1 reverse transcriptase [Cucumis melo var. makuwa]7.18e-1362.07Show/hide
Query:  SGKNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMS
        SG NVG GI DAA C GIRS    + DAT+ DAC+ +GR ISD +LVRRRECL R  S
Subjt:  SGKNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMS

KAA0067621.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.20e-1046.67Show/hide
Query:  KNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFPNVF
        K+V RG+PD    VG    ER  PD     + + VGR I DA+LV  +E LFR  S DV P+  +N GISF +VF
Subjt:  KNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFPNVF

TYJ97142.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.22e-1046.67Show/hide
Query:  KNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFPNVF
        K+V RG+PD    VG    ER  PD     + + VGR I DA+LV  +E LFR  S DV P+  +N GISF +VF
Subjt:  KNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFPNVF

TYK14413.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.33e-1151.81Show/hide
Query:  DAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFPNV-------FVRREYPCLL
        D  +  GIR   R   DA+       VG+G  DA LVRRRE L R +SPDV+P+VV  VGISFP+V       FVRREYP LL
Subjt:  DAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFPNV-------FVRREYPCLL

TYK29255.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.20e-0964.44Show/hide
Query:  LVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFP
        LVDACH VG+GI D +LVRRRECL + +SPD + +VVKNV  S P
Subjt:  LVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFP

TrEMBL top hitse value%identityAlignment
A0A5A7VPX1 CACTA en-spm transposon protein4.8e-0846.67Show/hide
Query:  KNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFPNVF
        K+V RG+PD    VG    ER  PD     + + VGR I DA+LV  +E LFR  S DV P+  +N GISF +VF
Subjt:  KNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFPNVF

A0A5D3BBD4 CACTA en-spm transposon protein4.8e-0846.67Show/hide
Query:  KNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFPNVF
        K+V RG+PD    VG    ER  PD     + + VGR I DA+LV  +E LFR  S DV P+  +N GISF +VF
Subjt:  KNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFPNVF

A0A5D3CRC0 CACTA en-spm transposon protein2.2e-0851.81Show/hide
Query:  DAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFP-------NVFVRREYPCLL
        D  +  GIR   R   DA+       VG+G  DA LVRRRE L R +SPDV+P+VV  VGISFP       +VFVRREYP LL
Subjt:  DAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFP-------NVFVRREYPCLL

A0A5D3CX81 Reverse transcriptase1.0e-1062.07Show/hide
Query:  SGKNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMS
        SG NVG GI DAA C GIRS    + DAT+ DAC+ +GR ISD +LVRRRECL R  S
Subjt:  SGKNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMS

A0A5D3E1C4 CACTA en-spm transposon protein4.1e-0764.44Show/hide
Query:  LVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFP
        LVDACH VG+GI D +LVRRRECL + +SPD + +VVKNV  S P
Subjt:  LVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGAAAAAACGTCGGAAGAGGCATTCCCGATGCCGCGTCATGCGTCGGCATAAGGTCTTTTGAGAGAGAAACTCCCGATGCCACTTTGGTCGATGCATGTCACAG
CGTCGGGAGAGGCATTTCCGACGCCTTGTTGGTACGGCGTCGGGAATGCCTCTTCCGATTCATGTCTCCCGACGTTGTTCCCGAGGTTGTGAAAAACGTTGGCATATCCT
TTCCCAACGTTTTTGTGCGTCGGGAGTATCCTTGTCTCTTGCAGTGTTTGGAATTGTTGCCCATGTTTTGCAAATATATTAGTAAAGGATACCTACATTTAAACCATTTT
CATGCAAAACACGAATGGAGGGAAGATCTTGGAGGGGTGGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGAAAAAACGTCGGAAGAGGCATTCCCGATGCCGCGTCATGCGTCGGCATAAGGTCTTTTGAGAGAGAAACTCCCGATGCCACTTTGGTCGATGCATGTCACAG
CGTCGGGAGAGGCATTTCCGACGCCTTGTTGGTACGGCGTCGGGAATGCCTCTTCCGATTCATGTCTCCCGACGTTGTTCCCGAGGTTGTGAAAAACGTTGGCATATCCT
TTCCCAACGTTTTTGTGCGTCGGGAGTATCCTTGTCTCTTGCAGTGTTTGGAATTGTTGCCCATGTTTTGCAAATATATTAGTAAAGGATACCTACATTTAAACCATTTT
CATGCAAAACACGAATGGAGGGAAGATCTTGGAGGGGTGGGGTAA
Protein sequenceShow/hide protein sequence
MSGKNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFPNVFVRREYPCLLQCLELLPMFCKYISKGYLHLNHF
HAKHEWREDLGGVG