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IVF0003835 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003835
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:20514271..20514671
RNA-Seq ExpressionIVF0003835
SyntenyIVF0003835
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]8.82e-4891.11Show/hide
Query:  RHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLSV
        +HGTYFEDNRHHLVS+ IPPPSQPRLPKNRGSNLGGKEIRLVE MAPNLEEEVKEHKDESDSSKSD HWKRPLKKAKVSGD+PDG GLS 
Subjt:  RHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLSV

KAA0057699.1 hypothetical protein E6C27_scaffold126G00510 [Cucumis melo var. makuwa]3.76e-4990.32Show/hide
Query:  MRHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLSVTI
        MRH TYFE+NRHHLVS+AIPPPSQPRLPKNRGSNLGGKEIRLVE MAPNLEEEV EHKDESDSSKSD HWKRPLKKAKVSGDNPDG GLS  I
Subjt:  MRHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLSVTI

KAA0061211.1 hypothetical protein E6C27_scaffold455G00380 [Cucumis melo var. makuwa]2.86e-59100Show/hide
Query:  MRHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLS
        MRHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLS
Subjt:  MRHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLS

KAA0066963.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.04e-4791.11Show/hide
Query:  RHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLSV
        RH TYFEDNRHHLVS+AIPPPSQPRLPKNRGSNLGGKEIRLVE+MAPNLEEEV EHKDESDSSKSD HWKR LKKAKVSGDNPDG GLS 
Subjt:  RHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLSV

TYK16513.1 hypothetical protein E5676_scaffold21G003220 [Cucumis melo var. makuwa]9.35e-4988.89Show/hide
Query:  RHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLSV
        RHGTYFEDNRHHL+S+AIPPPSQP+LPKNRGSNLGGK+IRLVE+M PNLEEEVKEHKDESDSSKSD HWKRPLKKAKVS DNPDG GLS 
Subjt:  RHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLSV

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein4.1e-3992.13Show/hide
Query:  RHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLS
        +HGTYFEDNRHHLVS+ IPPPSQPRLPKNRGSNLGGKEIRLVE MAPNLEEEVKEHKDESDSSKSD HWKRPLKKAKVSGD+PDG GLS
Subjt:  RHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLS

A0A5A7UVX0 PMD domain-containing protein1.4e-3990.32Show/hide
Query:  MRHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLSVTI
        MRH TYFE+NRHHLVS+AIPPPSQPRLPKNRGSNLGGKEIRLVE MAPNLEEEV EHKDESDSSKSD HWKRPLKKAKVSGDNPDG GLS  I
Subjt:  MRHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLSVTI

A0A5D3C7E7 Uncharacterized protein5.6e-44100Show/hide
Query:  MRHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLS
        MRHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLS
Subjt:  MRHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLS

A0A5D3CXA5 Uncharacterized protein4.6e-3889.89Show/hide
Query:  RHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLS
        RHGTYFEDNRHHL+S+AIPPPSQP+LPKNRGSNLGGK+IRLVE+M PNLEEEVKEHKDESDSSKSD HWKRPLKKAKVS DNPDG GLS
Subjt:  RHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLS

A0A5D3E2X8 Putative mitochondrial protein4.6e-3892.13Show/hide
Query:  RHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLS
        RH TYFEDNRHHLVS+AIPPPSQPRLPKNRGSNLGGKEIRLVE+MAPNLEEEV EHKDESDSSKSD HWKR LKKAKVSGDNPDG GLS
Subjt:  RHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCATGGGACCTATTTTGAGGATAACAGACACCATTTGGTGAGTAATGCCATTCCTCCTCCTTCACAGCCTAGACTACCCAAGAACCGAGGGAGCAACCTGGGTGG
TAAAGAAATTCGATTGGTTGAGATGATGGCTCCTAATCTTGAGGAGGAGGTAAAGGAGCATAAAGATGAGAGCGATAGCAGCAAAAGTGACCATCATTGGAAGAGACCTT
TGAAGAAAGCGAAGGTATCAGGTGATAATCCCGACGGAAGCGGTTTAAGCGTCACCATTGAACGATCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCATGGGACCTATTTTGAGGATAACAGACACCATTTGGTGAGTAATGCCATTCCTCCTCCTTCACAGCCTAGACTACCCAAGAACCGAGGGAGCAACCTGGGTGG
TAAAGAAATTCGATTGGTTGAGATGATGGCTCCTAATCTTGAGGAGGAGGTAAAGGAGCATAAAGATGAGAGCGATAGCAGCAAAAGTGACCATCATTGGAAGAGACCTT
TGAAGAAAGCGAAGGTATCAGGTGATAATCCCGACGGAAGCGGTTTAAGCGTCACCATTGAACGATCATCTTGA
Protein sequenceShow/hide protein sequence
MRHGTYFEDNRHHLVSNAIPPPSQPRLPKNRGSNLGGKEIRLVEMMAPNLEEEVKEHKDESDSSKSDHHWKRPLKKAKVSGDNPDGSGLSVTIERSS