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IVF0003845 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003845
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr05:6972301..6972531
RNA-Seq ExpressionIVF0003845
SyntenyIVF0003845
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034830.1 Gag-pro-like protein [Cucumis melo var. makuwa]1.45e-3385.53Show/hide
Query:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK
        MDAKILLV QMSMQEI+VD+IIDASSNKETSNDTSITVI ENTISPNPLVYQCPP+FELNNW+IK  LK S+ SQK
Subjt:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK

KAA0048196.1 uncharacterized protein E6C27_scaffold63G001070 [Cucumis melo var. makuwa]8.47e-3380.26Show/hide
Query:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK
        MD KILLV QMSMQEIKV+MIIDASSNK+TSNDT ITVIFENTI P+PL+YQC PEFE+NNW+IK+TLK S+ SQK
Subjt:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK

KAA0062651.1 uncharacterized protein E6C27_scaffold79G001690 [Cucumis melo var. makuwa]4.92e-3381.58Show/hide
Query:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK
        M+ KILLV QMSMQEI++DMIIDASSNK+TS DTSITVI ENTISPNPLVYQ PPEFELNNW+IKRTLK S+  QK
Subjt:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK

TYK01184.1 uncharacterized protein E5676_scaffold2044G00260 [Cucumis melo var. makuwa]8.51e-3482.89Show/hide
Query:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK
        M+ KILLV QMSMQEI++DMIIDASSNK+TS DTSITVI ENTISPNPLVYQ PPEFELNNW+IKRTLK S+ SQK
Subjt:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK

TYK19418.1 uncharacterized protein E5676_scaffold443G00580 [Cucumis melo var. makuwa]2.31e-3484.21Show/hide
Query:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK
        MDAKILLV QM MQEI+VDMIID SSNKETSNDTSITVIFEN IS NPLVYQCPP+FELNNW+IKR LK S+ SQK
Subjt:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK

TrEMBL top hitse value%identityAlignment
A0A5A7SV36 Gag-pro-like protein1.6e-2585.53Show/hide
Query:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK
        MDAKILLV QMSMQEI+VD+IIDASSNKETSNDTSITVI ENTISPNPLVYQCPP+FELNNW+IK  LK S+ SQK
Subjt:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK

A0A5A7U1T7 Uncharacterized protein3.8e-2480.26Show/hide
Query:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK
        MD KILLV QMSMQEIKV+MIIDASSNK+TSNDT ITVIFENTI P+PL+YQC PEFE+NNW+IK+TLK S+ SQK
Subjt:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK

A0A5A7VAG0 Uncharacterized protein1.1e-2381.58Show/hide
Query:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK
        M+ KILLV QMSMQEI++DMIIDASSNK+TS DTSITVI ENTISPNPLVYQ PPEFELNNW+IKRTLK S+  QK
Subjt:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK

A0A5D3BPR1 Uncharacterized protein2.9e-2482.89Show/hide
Query:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK
        M+ KILLV QMSMQEI++DMIIDASSNK+TS DTSITVI ENTISPNPLVYQ PPEFELNNW+IKRTLK S+ SQK
Subjt:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK

A0A5D3D765 Uncharacterized protein5.9e-2584.21Show/hide
Query:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK
        MDAKILLV QM MQEI+VDMIID SSNKETSNDTSITVIFEN IS NPLVYQCPP+FELNNW+IKR LK S+ SQK
Subjt:  MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCAAAGATTCTTTTGGTACGACAAATGAGCATGCAAGAAATCAAGGTCGATATGATTATTGATGCTTCATCTAATAAGGAAACTTCAAATGATACCTCAATTAC
GGTTATCTTCGAGAATACTATTTCGCCTAATCCATTGGTTTATCAGTGTCCACCAGAATTTGAGTTGAACAATTGGAAGATCAAGAGGACGCTAAAATTCTCTAGGAGAT
CACAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCAAAGATTCTTTTGGTACGACAAATGAGCATGCAAGAAATCAAGGTCGATATGATTATTGATGCTTCATCTAATAAGGAAACTTCAAATGATACCTCAATTAC
GGTTATCTTCGAGAATACTATTTCGCCTAATCCATTGGTTTATCAGTGTCCACCAGAATTTGAGTTGAACAATTGGAAGATCAAGAGGACGCTAAAATTCTCTAGGAGAT
CACAAAAGTAA
Protein sequenceShow/hide protein sequence
MDAKILLVRQMSMQEIKVDMIIDASSNKETSNDTSITVIFENTISPNPLVYQCPPEFELNNWKIKRTLKFSRRSQK