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IVF0003863 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003863
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr12:10849281..10849513
RNA-Seq ExpressionIVF0003863
SyntenyIVF0003863
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044273.1 uncharacterized protein E6C27_scaffold2741G00320 [Cucumis melo var. makuwa]8.66e-1754.55Show/hide
Query:  MHFNDEEMKFNIVNVMKFSVDVENCS-----------EEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL
        MHFNDEE+KFN+VN MKF +D +N +           E  Y ELFST+EF EE++ +Y+LEE NA+ GE+KFE LDL
Subjt:  MHFNDEEMKFNIVNVMKFSVDVENCS-----------EEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL

KAA0062395.1 uncharacterized protein E6C27_scaffold154G001730 [Cucumis melo var. makuwa]8.93e-2464.94Show/hide
Query:  MHFNDEEMKFNIVNVMKFSVDVEN-----------CSEEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL
        MHFN+EE+ FN++N MKF  +VEN           C EEAYYELFSTEEF EEDE DY+LEEVNA+ GEKKF+PLDL
Subjt:  MHFNDEEMKFNIVNVMKFSVDVEN-----------CSEEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL

KAA0066655.1 uncharacterized protein E6C27_scaffold979G00870 [Cucumis melo var. makuwa]6.96e-2062.34Show/hide
Query:  MHFNDEEMKFNIVNVMKFSVDVENCS-----------EEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL
        M FNDEE+KFNIVNV+KF  DVENCS           EEA YELFST EF EED+ +Y+LEEVN +  E KFE LDL
Subjt:  MHFNDEEMKFNIVNVMKFSVDVENCS-----------EEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL

TYK05498.1 uncharacterized protein E5676_scaffold83G002090 [Cucumis melo var. makuwa]1.76e-1855.84Show/hide
Query:  MHFNDEEMKFNIVNVMKFSVDVENCS-----------EEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL
        MHFNDEE+KFN+VN MKF +D +N +           EE Y ELFST+EF EE++ +Y+LEE NA+ GE+KFE LDL
Subjt:  MHFNDEEMKFNIVNVMKFSVDVENCS-----------EEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL

TYK26585.1 uncharacterized protein E5676_scaffold313G002140 [Cucumis melo var. makuwa]5.70e-2464.94Show/hide
Query:  MHFNDEEMKFNIVNVMKFSVDVEN-----------CSEEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL
        MHFN+EE+ FN++N MKF  +VEN           C EEAYYELFSTEEF EEDE DY+LEEVNA+ GEKKF+PLDL
Subjt:  MHFNDEEMKFNIVNVMKFSVDVEN-----------CSEEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL

TrEMBL top hitse value%identityAlignment
A0A5A7TL87 Uncharacterized protein6.5e-1254.55Show/hide
Query:  MHFNDEEMKFNIVNVMKFSVDVENCS-----------EEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL
        MHFNDEE+KFN+VN MKF +D +N +           E  Y ELFST+EF EE++ +Y+LEE NA+ GE+KFE LDL
Subjt:  MHFNDEEMKFNIVNVMKFSVDVENCS-----------EEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL

A0A5A7V931 Uncharacterized protein1.0e-1764.94Show/hide
Query:  MHFNDEEMKFNIVNVMKFSVDVEN-----------CSEEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL
        MHFN+EE+ FN++N MKF  +VEN           C EEAYYELFSTEEF EEDE DY+LEEVNA+ GEKKF+PLDL
Subjt:  MHFNDEEMKFNIVNVMKFSVDVEN-----------CSEEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL

A0A5D3BYK3 Uncharacterized protein7.0e-1462.34Show/hide
Query:  MHFNDEEMKFNIVNVMKFSVDVENCS-----------EEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL
        M FNDEE+KFNIVNV+KF  DVENCS           EEA YELFST EF EED+ +Y+LEEVN +  E KFE LDL
Subjt:  MHFNDEEMKFNIVNVMKFSVDVENCS-----------EEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL

A0A5D3C2R8 Uncharacterized protein1.0e-1255.84Show/hide
Query:  MHFNDEEMKFNIVNVMKFSVDVENCS-----------EEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL
        MHFNDEE+KFN+VN MKF +D +N +           EE Y ELFST+EF EE++ +Y+LEE NA+ GE+KFE LDL
Subjt:  MHFNDEEMKFNIVNVMKFSVDVENCS-----------EEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL

A0A5D3DTC1 Uncharacterized protein1.0e-1764.94Show/hide
Query:  MHFNDEEMKFNIVNVMKFSVDVEN-----------CSEEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL
        MHFN+EE+ FN++N MKF  +VEN           C EEAYYELFSTEEF EEDE DY+LEEVNA+ GEKKF+PLDL
Subjt:  MHFNDEEMKFNIVNVMKFSVDVEN-----------CSEEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTTAATGATGAAGAGATGAAGTTCAACATTGTCAACGTAATGAAGTTTTCCGTTGATGTTGAGAACTGCAGTGAAGAAGCCTATTATGAGTTGTTTAGCACTGA
AGAATTCCATGAGGAAGATGAATCAGATTATGTACTAGAAGAAGTGAACGCCATACGTGGCGAAAAGAAGTTTGAACCTTTGGATCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTTTAATGATGAAGAGATGAAGTTCAACATTGTCAACGTAATGAAGTTTTCCGTTGATGTTGAGAACTGCAGTGAAGAAGCCTATTATGAGTTGTTTAGCACTGA
AGAATTCCATGAGGAAGATGAATCAGATTATGTACTAGAAGAAGTGAACGCCATACGTGGCGAAAAGAAGTTTGAACCTTTGGATCTATAA
Protein sequenceShow/hide protein sequence
MHFNDEEMKFNIVNVMKFSVDVENCSEEAYYELFSTEEFHEEDESDYVLEEVNAIRGEKKFEPLDL