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IVF0003877 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003877
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTetratricopeptide repeat-containing family protein
Genome locationchr08:2251151..2253045
RNA-Seq ExpressionIVF0003877
SyntenyIVF0003877
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052741.1 tetratricopeptide repeat-containing family protein [Cucumis melo var. makuwa]4.63e-6698.13Show/hide
Query:  MNWILKPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDKYLTFLKSVEPHSEKVLQVE
        MNWILKPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDKYLTFLKSVEPHSEKVLQVE
Subjt:  MNWILKPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDKYLTFLKSVEPHSEKVLQVE

Query:  IDLWKAM
        IDLWK +
Subjt:  IDLWKAM
KAA0052743.1 putative Phosphoinositide binding [Cucumis melo var. makuwa]8.04e-2375Show/hide
Query:  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDK
        KPK VV +TEDDKSEVLRAL  DELRDRV+DVE++N SAQV DGLK  + VPD LSMDLK S+GNSVHSRLQNF++
Subjt:  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDK
XP_008439938.1 PREDICTED: uncharacterized protein LOC103484575 [Cucumis melo]8.03e-2375Show/hide
Query:  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDK
        KPK VV +TEDDKSEVLRAL  DELRDRV+DVE++N SAQV DGLK  + VPD LSMDLK S+GNSVHSRLQNF++
Subjt:  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDK
XP_008439939.1 PREDICTED: uncharacterized protein LOC103484576 [Cucumis melo]4.94e-79100Show/hide
Query:  MNWILKPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDKYLTFLKSVEPHSEKVLQVE
        MNWILKPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDKYLTFLKSVEPHSEKVLQVE
Subjt:  MNWILKPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDKYLTFLKSVEPHSEKVLQVE

Query:  IDLWKAMDDEMINQSLTPMC
        IDLWKAMDDEMINQSLTPMC
Subjt:  IDLWKAMDDEMINQSLTPMC
XP_011658174.1 uncharacterized protein LOC105435956 [Cucumis sativus]5.59e-2578.95Show/hide
Query:  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDK
        KPK VVD+TED+KSEVLRALE DELR+RV+ VE+HN SAQV DGLKAND VP  LSMDLK S GNSVHSRLQNFD+
Subjt:  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDK
TrEMBL top hitse value%identityAlignment
A0A0A0KHG9 FYVE-type domain-containing protein3.7e-2178.95Show/hide
Query:  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDK
        KPK VVD+TED+KSEVLRALE DELR+RV+ VE+HN SAQV DGLKAND VP  LSMDLK S GNSVHSRLQNFD+
Subjt:  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDK
A0A1S3B0K6 uncharacterized protein LOC1034845752.6e-1975Show/hide
Query:  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDK
        KPK VV +TEDDKSEVLRAL  DELRDRV+DVE++N SAQV DGLK  + VPD LSMDLK S+GNSVHSRLQNF++
Subjt:  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDK
A0A1S3B0P6 uncharacterized protein LOC1034845768.9e-60100Show/hide
Query:  MNWILKPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDKYLTFLKSVEPHSEKVLQVE
        MNWILKPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDKYLTFLKSVEPHSEKVLQVE
Subjt:  MNWILKPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDKYLTFLKSVEPHSEKVLQVE

Query:  IDLWKAMDDEMINQSLTPMC
        IDLWKAMDDEMINQSLTPMC
Subjt:  IDLWKAMDDEMINQSLTPMC
A0A5A7U9Z7 Putative Phosphoinositide binding2.6e-1975Show/hide
Query:  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDK
        KPK VV +TEDDKSEVLRAL  DELRDRV+DVE++N SAQV DGLK  + VPD LSMDLK S+GNSVHSRLQNF++
Subjt:  KPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDK
A0A5A7UGU6 Tetratricopeptide repeat-containing family protein9.9e-5198.13Show/hide
Query:  MNWILKPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDKYLTFLKSVEPHSEKVLQVE
        MNWILKPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDKYLTFLKSVEPHSEKVLQVE
Subjt:  MNWILKPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDKYLTFLKSVEPHSEKVLQVE

Query:  IDLWKAM
        IDLWK +
Subjt:  IDLWKAM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTGGATACTCAAACCAAAAGATGTGGTTGATGTCACAGAGGATGACAAGTCTGAAGTGCTTAGAGCATTGGAAGAAGATGAGTTGCGAGACCGTGTGGAGGATGT
GGAGATACATAATGCATCAGCACAAGTTGGAGACGGTCTCAAAGCAAATGATGGAGTGCCAGATCGTCTGTCCATGGATTTAAAGTTTTCAGAAGGCAATTCAGTTCATT
CCCGTTTGCAGAATTTTGACAAATATCTGACCTTTCTAAAGAGCGTGGAGCCTCATTCAGAGAAAGTACTTCAGGTAGAAATAGATCTTTGGAAGGCAATGGACGACGAG
ATGATCAATCAATCTCTCACTCCGATGTGTTGA
mRNA sequenceShow/hide mRNA sequence
TGAAGAGAAACAGAGGTAAAAAGGTGTGTGTAATAAGGGACGGGCTTTACCATAAAGTAAAACGACGGCGTTTTAGTTGTTTAATGGCCCAAATCCAAAACACTTCTTAA
GCAAAATCAGACTTTGGAGTCAATTTAAGAAGAAAGGCACTTGCCCTTAGAAGAGAAGGGGACATTGATGAAGCTGAGGAAGTCTTGAAAAGAGCAAAGGTGGTGGAGAT
CCAAATGGATGAACTGGATACTCAAACCAAAAGATGTGGTTGATGTCACAGAGGATGACAAGTCTGAAGTGCTTAGAGCATTGGAAGAAGATGAGTTGCGAGACCGTGTG
GAGGATGTGGAGATACATAATGCATCAGCACAAGTTGGAGACGGTCTCAAAGCAAATGATGGAGTGCCAGATCGTCTGTCCATGGATTTAAAGTTTTCAGAAGGCAATTC
AGTTCATTCCCGTTTGCAGAATTTTGACAAATATCTGACCTTTCTAAAGAGCGTGGAGCCTCATTCAGAGAAAGTACTTCAGGTAGAAATAGATCTTTGGAAGGCAATGG
ACGACGAGATGATCAATCAATCTCTCACTCCGATGTGTTGA
Protein sequenceShow/hide protein sequence
MNWILKPKDVVDVTEDDKSEVLRALEEDELRDRVEDVEIHNASAQVGDGLKANDGVPDRLSMDLKFSEGNSVHSRLQNFDKYLTFLKSVEPHSEKVLQVEIDLWKAMDDE
MINQSLTPMC