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IVF0003879 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003879
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag protease polyprotein
Genome locationchr03:14871108..14871404
RNA-Seq ExpressionIVF0003879
SyntenyIVF0003879
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032209.1 gag protease polyprotein [Cucumis melo var. makuwa]2.31e-3694.37Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
        MPPRRGARRGGRGGRGRGAGRV PEVQPVAQATDPAA +THADLAA+EQRFRDLIMQMREQQQPAPPAPAP
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
KAA0036867.1 gag protease polyprotein [Cucumis melo var. makuwa]3.62e-3898.59Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAA+EQRFRDLIMQMREQQQPAPPAPAP
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
KAA0059806.1 gag protease polyprotein [Cucumis melo var. makuwa]1.98e-3697.18Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAA+EQRFRDLIM+MREQQQPAPPAPAP
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
TYJ95918.1 gag protease polyprotein [Cucumis melo var. makuwa]2.98e-3695.77Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDP APVTH DLAA+EQRFRDLIMQMREQQQPAPPAPAP
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
TYK15298.1 gag protease polyprotein [Cucumis melo var. makuwa]2.82e-3674.74Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAPVQHRLLLQPGSSTSCAPGCAGSVV
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVT  DLA++EQRFRDLIMQMREQQQPAPPAPA       L P  + + AP     +V
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAPVQHRLLLQPGSSTSCAPGCAGSVV
TrEMBL top hitse value%identityAlignment
A0A5A7STS5 Reverse transcriptase6.7e-2998.59Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAA+EQRFRDLIMQMREQQQPAPPAPAP
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
A0A5A7T5I2 Gag protease polyprotein6.7e-2984.09Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAPVQHRLLLQPGSSTSCAP
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAA+EQRFRDLIMQMREQQQPAPPAPAP     L+ P  + + AP
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAPVQHRLLLQPGSSTSCAP
A0A5A7TR38 Ty3-gypsy retrotransposon protein6.7e-2998.59Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAA+EQRFRDLIMQMREQQQPAPPAPAP
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
A0A5A7V8X5 Pol protein6.7e-2998.59Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAA+EQRFRDLIMQMREQQQPAPPAPAP
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
A0A5A7VEB0 Gag protease polyprotein6.7e-2998.59Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAA+EQRFRDLIMQMREQQQPAPPAPAP
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCACTGACCCGGCTGC
ACCAGTTACTCATGCGGATCTAGCTGCCATAGAGCAGAGGTTTAGAGATTTGATTATGCAGATGCGGGAGCAGCAGCAGCCTGCCCCGCCAGCTCCAGCGCCAGTCCAGC
ACCGGCTCCTGCTCCAACCCGGCTCCAGTACCAGTTGCGCCCCAGGTTGTGCCGGATCAGTTGTCAGCAGAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCACTGACCCGGCTGC
ACCAGTTACTCATGCGGATCTAGCTGCCATAGAGCAGAGGTTTAGAGATTTGATTATGCAGATGCGGGAGCAGCAGCAGCCTGCCCCGCCAGCTCCAGCGCCAGTCCAGC
ACCGGCTCCTGCTCCAACCCGGCTCCAGTACCAGTTGCGCCCCAGGTTGTGCCGGATCAGTTGTCAGCAGAGGCTAA
Protein sequenceShow/hide protein sequence
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAIEQRFRDLIMQMREQQQPAPPAPAPVQHRLLLQPGSSTSCAPGCAGSVVSRG