CuGenDBv2

Gene ID	IVF0003916
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	PMD domain-containing protein
Genome location	chr08:23616720..23617217
RNA-Seq Expression	IVF0003916
Synteny	IVF0003916
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]

7.17e-87

90.3

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Query:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST
        MRKIFAAIA S SNNLTFLKELVDGYFQGVENHNQM  SILLQSTKDAQLME KGFVKTLRLDEN IL+ETSTVQRRLARLSAKEAKLEAKLKVVRTEST
Subjt:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST

Query:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP
        KLS +ISKNEIELKQKQ EISKTCEEIDK +CA II D DAKMLSALRESL+NTLEELKNLKWTP
Subjt:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP

KAA0060137.1 uncharacterized protein E6C27_scaffold39G00580 [Cucumis melo var. makuwa]

7.50e-107

100

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Query:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST
        MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST
Subjt:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST

Query:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP
        KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP
Subjt:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]

1.61e-85

89.7

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Query:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST
        MRKIFAAIA S SNNLTFLKELVDGYFQGVENHNQM  SILLQSTKDAQLME KGFVKTLRLDEN IL+ETSTVQRRLARLSAKEAKLEAKLKVVRTEST
Subjt:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST

Query:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP
        KLS +ISKNEIELKQKQ EISKTCEEIDK +CA II D DAKML ALRESL+NTLEELKNLKWTP
Subjt:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP

TYK21862.1 uncharacterized protein E5676_scaffold836G00150 [Cucumis melo var. makuwa]

7.29e-89

91.93

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Query:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST
        MRKIFAAIA SGSNNLTFLKELVDGYFQGVENHNQM  SILLQSTKDAQL+EAKGFVKTLR+DEN ILEETSTVQR LARLSAKEAKLEAKLK VRTE T
Subjt:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST

Query:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNL
        KLS IISKNEIELKQKQHEISKTCEEIDK ECAPII DVDAKMLSALRESL+NTLEELKNL
Subjt:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNL

XP_016903650.1 PREDICTED: uncharacterized protein LOC103504169 [Cucumis melo]

5.60e-93

92.12

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Query:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST
        MRKIFAAIA SGSNNLTFLKELVDGYFQGVENHNQM  SILLQSTKDAQL+EAKGFVKTLR+DEN ILEETSTVQR LARLSAKEAKLEAKLK VRTE T
Subjt:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST

Query:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP
        KLS IISKNEIELKQKQHEISKTCEEIDK ECAPII DVDAKMLSALRESL+NTLEELKNLKWTP
Subjt:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E6N4 uncharacterized protein LOC103504169

2.4e-71

92.12

Show/hide

Query:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST
        MRKIFAAIA SGSNNLTFLKELVDGYFQGVENHNQM  SILLQSTKDAQL+EAKGFVKTLR+DEN ILEETSTVQR LARLSAKEAKLEAKLK VRTE T
Subjt:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST

Query:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP
        KLS IISKNEIELKQKQHEISKTCEEIDK ECAPII DVDAKMLSALRESL+NTLEELKNLKWTP
Subjt:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP

A0A5A7SJ85 Uncharacterized protein

3.8e-69

90.3

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Query:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST
        MRKIFAAIA S SNNLTFLKELVDGYFQGVENHNQM  SILLQSTKDAQLME KGFVKTLRLDEN IL+ETSTVQRRLARLSAKEAKLEAKLKVVRTEST
Subjt:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST

Query:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP
        KLS +ISKNEIELKQKQ EISKTCEEIDK +CA II D DAKMLSALRESL+NTLEELKNLKWTP
Subjt:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP

A0A5A7SWI5 Uncharacterized protein

2.4e-71

92.12

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Query:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST
        MRKIFAAIA SGSNNLTFLKELVDGYFQGVENHNQM  SILLQSTKDAQL+EAKGFVKTLR+DEN ILEETSTVQR LARLSAKEAKLEAKLK VRTE T
Subjt:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST

Query:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP
        KLS IISKNEIELKQKQHEISKTCEEIDK ECAPII DVDAKMLSALRESL+NTLEELKNLKWTP
Subjt:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP

A0A5A7UZR8 Uncharacterized protein

6.7e-82

100

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Query:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST
        MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST
Subjt:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST

Query:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP
        KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP
Subjt:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP

A0A5D3C453 Uncharacterized protein

1.9e-68

89.7

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Query:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST
        MRKIFAAIA S SNNLTFLKELVDGYFQGVENHNQM  SILLQSTKDAQLME KGFVKTLRLDEN IL+ETSTVQRRLARLSAKEAKLEAKLKVVRTEST
Subjt:  MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTEST

Query:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP
        KLS +ISKNEIELKQKQ EISKTCEEIDK +CA II D DAKML ALRESL+NTLEELKNLKWTP
Subjt:  KLSDIISKNEIELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCGTAAGATCTTTGCTGCAATTGCGATTAGTGGCAGCAACAACCTTACCTTTTTAAAAGAACTTGTGGATGGTTACTTCCAAGGTGTAGAGAACCATAATCAAATGTG
TTTCTCAATTTTGCTCCAATCAACTAAGGATGCTCAATTAATGGAGGCGAAAGGTTTTGTGAAGACTTTGCGACTTGATGAGAACTGTATATTGGAGGAGACAAGTACTG
TCCAACGCCGCCTTGCGCGACTATCCGCCAAAGAGGCTAAACTAGAAGCAAAACTAAAAGTGGTACGGACAGAGTCCACCAAACTTTCTGACATAATTTCTAAAAATGAG
ATAGAGCTAAAGCAGAAGCAGCATGAGATTTCAAAGACTTGCGAGGAAATTGACAAACATGAATGTGCCCCCATCATTGAAGATGTTGATGCAAAAATGTTGTCGGCACT
CCGTGAATCTTTAAAAAACACATTAGAAGAGCTTAAGAACCTTAAATGGACCCCTTGA

mRNA sequence

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Protein sequence

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MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTLRLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSDIISKNE
IELKQKQHEISKTCEEIDKHECAPIIEDVDAKMLSALRESLKNTLEELKNLKWTP

IVF0003916 (gene) of Melon (IVF77) v1 genome