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IVF0003930 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003930
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionpolcalcin Syr v 3-like
Genome locationchr03:11547575..11548215
RNA-Seq ExpressionIVF0003930
SyntenyIVF0003930
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646616.1 hypothetical protein Csa_005682 [Cucumis sativus]1.86e-4593.67Show/hide
Query:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKE
        MADSDG +MECERIFKRFD+NGDGKISLSELE ALHALGSSAPEEVGRRMSEIDKDGNG+ISLEELCDFQRANPDLMKE
Subjt:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKE

XP_008445690.1 PREDICTED: polcalcin Syr v 3-like [Cucumis melo]3.35e-53100Show/hide
Query:  MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL
        MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL

XP_022929895.1 polcalcin Phl p 7-like [Cucurbita moschata]8.22e-4384.52Show/hide
Query:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL
        MA+S+  + ECERIF RFD NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKDGNGFISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL

XP_023549323.1 polcalcin Phl p 7-like [Cucurbita pepo subsp. pepo]2.36e-4283.33Show/hide
Query:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL
        MA+S+  + ECERIF RFD NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKDGNGFISL+ELC+FQRANPDLMKEVC+RL
Subjt:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL

XP_038886760.1 polcalcin Phl p 7-like [Benincasa hispida]2.02e-4386.9Show/hide
Query:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL
        MADS+G + ECERIFKRFD +GDGKISLSELE+AL ALGSS+PEEV RRMSEIDKDGNGFISL+ELCDFQRANPDLMKEVCKRL
Subjt:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL

TrEMBL top hitse value%identityAlignment
A0A0A0KAW9 Uncharacterized protein1.6e-3694.05Show/hide
Query:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL
        MADSDG +MECERIFKRFD+NGDGKISLSELE ALHALGSSAPEEVGRRMSEIDKDGNG+ISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL

A0A1S3BDB5 polcalcin Syr v 3-like2.7e-39100Show/hide
Query:  MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL
        MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL

A0A5A7V7E6 Polcalcin Syr v 3-like2.7e-39100Show/hide
Query:  MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL
        MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL

A0A6J1EVJ6 polcalcin Phl p 7-like2.1e-3184.52Show/hide
Query:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL
        MA+S+  + ECERIF RFD NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKDGNGFISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL

A0A6J1JTM0 polcalcin Phl p 7-like3.9e-3083.33Show/hide
Query:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL
        MA+S+  + ECERIF RFD NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKDGNGFISL+EL +FQRANPDLMKEVCKRL
Subjt:  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 34.3e-1860.98Show/hide
Query:  MADSDGKM-ECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK
        MAD   ++ E ERIFKRFD NGDGKIS SEL   L  LGS  PEE+ R M+EID DG+GFIS EE   F RAN  L+K+V K
Subjt:  MADSDGKM-ECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK

O82040 Polcalcin Phl p 71.9e-1863.01Show/hide
Query:  ECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK
        + ERIFKRFD NGDGKISLSEL  AL  LGS++ +EV R M+EID DG+GFI   E   F  ANP LMK+V K
Subjt:  ECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK

P58171 Polcalcin Syr v 35.1e-1965.75Show/hide
Query:  ECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK
        E ERIFKRFD NGDGKIS SEL   L  LGS  PEE+ R M+EID DG+GFIS EE  DF RAN  L+K+V K
Subjt:  ECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK

Q39419 Polcalcin Bet v 41.5e-1860.24Show/hide
Query:  MADS--DGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK
        MAD     K E ERIFKRFD NGDGKIS +EL  AL  LGS  P+EV   M+EID DG+GFIS +E  DF RAN  L+K+V K
Subjt:  MADS--DGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK

Q84V36 Polcalcin Che a 31.9e-1866.2Show/hide
Query:  ERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK
        ERIFKRFD NGDGKIS SEL  AL  LGS  P+EV R M+EID DG+GFIS +E  DF RAN  L+K+V K
Subjt:  ERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK

Arabidopsis top hitse value%identityAlignment
AT1G24620.1 EF hand calcium-binding protein family2.6e-1043.28Show/hide
Query:  ECERIFKRFDINGDGKISLSELETALHALGSSAP-EEVGRRMSEIDKDGNGFISLEELCDFQRANPD
        E E +FK+FD+NGDGKIS  EL   + +LG   P EE+ + ++EID+ G+G+I+ EE  +      D
Subjt:  ECERIFKRFDINGDGKISLSELETALHALGSSAP-EEVGRRMSEIDKDGNGFISLEELCDFQRANPD

AT1G73630.1 EF hand calcium-binding protein family1.3e-0945.45Show/hide
Query:  MECERIFKRFDINGDGKISLSELETALHALGSS-APEEVGRRMSEIDKDGNGFISLEELCDFQRAN
        ME +++F +FD NGDGKIS+SEL     ++G+S   EE+ R + EID D +GFI+ EE     R++
Subjt:  MECERIFKRFDINGDGKISLSELETALHALGSS-APEEVGRRMSEIDKDGNGFISLEELCDFQRAN

AT3G03430.1 Calcium-binding EF-hand family protein6.8e-1956.79Show/hide
Query:  MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK
        MAD+  K E +RIFK+FD NGDGKIS +EL  AL  LGS   E++ R M+EID DG+G+IS +E  DF  AN  LMK+V K
Subjt:  MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK

AT5G17480.1 pollen calcium-binding protein 15.2e-1958.02Show/hide
Query:  MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK
        MAD+  K E +RIFK+FD NGDGKIS +ELE AL  LGS   ++V R M+EID DG+G IS +E  DF  AN  LMK+V K
Subjt:  MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCK

AT5G37770.1 EF hand calcium-binding protein family7.6e-1050.88Show/hide
Query:  ECERIFKRFDINGDGKISLSELETALHALGSSA-PEEVGRRMSEIDKDGNGFISLEE
        + +++F+RFD NGDGKIS+ EL+  + AL  +A PEE    M + D DGNGFI L+E
Subjt:  ECERIFKRFDINGDGKISLSELETALHALGSSA-PEEVGRRMSEIDKDGNGFISLEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACTCAGATGGAAAAATGGAATGCGAGCGAATCTTTAAGCGGTTCGATATCAACGGCGACGGAAAGATCTCGCTGTCGGAGCTTGAGACCGCTCTGCACGCCCT
TGGCTCCTCCGCGCCGGAAGAGGTTGGACGACGAATGTCGGAGATCGACAAGGACGGAAACGGTTTCATTTCGCTTGAGGAACTCTGCGATTTTCAGAGGGCTAATCCTG
ATTTGATGAAGGAGGTTTGCAAGAGGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATTTTAGCCTCATCTAACATCTCTAACCTCCGATTCTAAAGCTCTTTCTGTTATTTCAATTCTACATTACAAAATCCAGTCCCAAAAAACATAAAGAAAATAAAACAATA
CAAAAAAAGAAGAAGAAGAAGAAGAAATGGCAGACTCAGATGGAAAAATGGAATGCGAGCGAATCTTTAAGCGGTTCGATATCAACGGCGACGGAAAGATCTCGCTGTCG
GAGCTTGAGACCGCTCTGCACGCCCTTGGCTCCTCCGCGCCGGAAGAGGTTGGACGACGAATGTCGGAGATCGACAAGGACGGAAACGGTTTCATTTCGCTTGAGGAACT
CTGCGATTTTCAGAGGGCTAATCCTGATTTGATGAAGGAGGTTTGCAAGAGGCTTTAGTTTCGTTGAATTGGAATTCAGAATGTGATTGTAAAATTTTCTCCATTGTGCC
CTAATTCTTTGTCTGTGTTGTGTTTCATTATATTCTTTTTCTTTTCTGTTTTTAATTACTTTCTGTACCTTTGATCGAATTGTTTAATTAATTCATATTCGATCCATTTA
CCGAATTGGGAATTCTTATGAATTTTGTAACTAGTCGATGGGAAATTTTCTCTTGCTATACTACATACTACTTCGTCTTTATGGGACAAGG
Protein sequenceShow/hide protein sequence
MADSDGKMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGFISLEELCDFQRANPDLMKEVCKRL