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IVF0003935 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003935
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationtig00001329:352611..353179
RNA-Seq ExpressionIVF0003935
SyntenyIVF0003935
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650028.1 hypothetical protein Csa_011525 [Cucumis sativus]3.20e-5479.09Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGV-----------FRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRD
        MSLNCLSCQ+LQRTDSERHRDRQ+QTYYTSDEF+ S+RSWSGNL LR NRGG            FRGMADNKVAP+ HRRAVSFGGKEPRL+RSSGMRRD
Subjt:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGV-----------FRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRD

Query:  WSFEDLRTIR
        WSFEDLR IR
Subjt:  WSFEDLRTIR
XP_008448684.1 PREDICTED: uncharacterized protein LOC103490783 [Cucumis melo]5.19e-73100Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGVFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIRE
        MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGVFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIRE
Subjt:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGVFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIRE

Query:  EKEPSPNS
        EKEPSPNS
Subjt:  EKEPSPNS
XP_023007608.1 uncharacterized protein LOC111500186 [Cucurbita maxima]1.33e-3260Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLR---QNRGGVFRGMADNKVAPVCHRRA-----VSFGGKEPRLVRSSGMRRDWSF
        M+LNCLSCQLLQRTDSER  D Q+Q YY S + +PS RSWSGNLS R   + +    R + +++  PV  RR      +S G KEP+LVRSSGMRRDWSF
Subjt:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLR---QNRGGVFRGMADNKVAPVCHRRA-----VSFGGKEPRLVRSSGMRRDWSF

Query:  EDLRTIREEK
        EDLR IREEK
Subjt:  EDLRTIREEK
XP_031737872.1 uncharacterized protein LOC116402546 [Cucumis sativus]1.68e-6079.83Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGV-----------FRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRD
        MSLNCLSCQ+LQRTDSERHRDRQ+QTYYTSDEF+ S+RSWSGNL LR NRGG            FRGMADNKVAP+ HRRAVSFGGKEPRL+RSSGMRRD
Subjt:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGV-----------FRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRD

Query:  WSFEDLRTIREEKEPSPNS
        WSFEDLR IREEK+PSPNS
Subjt:  WSFEDLRTIREEKEPSPNS
XP_038905810.1 uncharacterized protein LOC120091761 [Benincasa hispida]3.23e-5683.49Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLR----QNRGGVFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLR
        MSLNCLSCQ+LQRTDSERHRD+QIQTYY SDEFD S+RSWSGNLS R     NRGG FRG+ +NKVAP+ HRRAVSFGGKEPRLVRSSGMRRDWSFEDLR
Subjt:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLR----QNRGGVFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLR

Query:  TIREEKEPS
        TIREE+EPS
Subjt:  TIREEKEPS
TrEMBL top hitse value%identityAlignment
A0A0A0L198 Uncharacterized protein6.6e-4682.61Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGG-------VFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFE
        MSLNCLSCQ+LQRTDSERHRDRQ+QTYYTSDEF+ S+RSWSGNL LR NRGG        FRGMADNKVAP+ HRRAVSFGGKEPRL+RSSGMRRDWSFE
Subjt:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGG-------VFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFE

Query:  DLRTIREEKEPSPNS
        DLR IREEK+PSPNS
Subjt:  DLRTIREEKEPSPNS
A0A1S3BJN6 uncharacterized protein LOC1034907837.8e-55100Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGVFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIRE
        MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGVFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIRE
Subjt:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGVFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIRE

Query:  EKEPSPNS
        EKEPSPNS
Subjt:  EKEPSPNS
A0A5A7UAS3 Uncharacterized protein7.8e-55100Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGVFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIRE
        MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGVFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIRE
Subjt:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGVFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIRE

Query:  EKEPSPNS
        EKEPSPNS
Subjt:  EKEPSPNS
A0A6J1GL99 uncharacterized protein LOC1114549681.6e-2360.83Show/hide
Query:  MSLNCLSCQL-LQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSL----RQNRGGVFRGMADNKVAPVCHRR-----AVSFG--GKEPRLVRSSGMRR
        MSLNCLSCQL LQR+DS++  +   Q  Y +D+     RSWSGNLS     RQN  G FR   +NKVAP+ HRR     AV+FG  GKEPRL+RS+GMRR
Subjt:  MSLNCLSCQL-LQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSL----RQNRGGVFRGMADNKVAPVCHRR-----AVSFG--GKEPRLVRSSGMRR

Query:  DWSFEDLRTIREEKEPSPNS
        DWSFEDLR IRE+KE SPNS
Subjt:  DWSFEDLRTIREEKEPSPNS
A0A6J1L834 uncharacterized protein LOC1115001864.2e-2460Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLR---QNRGGVFRGMADNKVAPVCHRR-----AVSFGGKEPRLVRSSGMRRDWSF
        M+LNCLSCQLLQRTDSER  D Q+Q YY S + +PS RSWSGNLS R   + +    R + +++  PV  RR      +S G KEP+LVRSSGMRRDWSF
Subjt:  MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLR---QNRGGVFRGMADNKVAPVCHRR-----AVSFGGKEPRLVRSSGMRRDWSF

Query:  EDLRTIREEK
        EDLR IREEK
Subjt:  EDLRTIREEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35215.1 unknown protein7.5e-1037.84Show/hide
Query:  MSLNCLSCQLLQRTDSER----HRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGVFRGMADNKVAPVCHRRAVS-----FGG-KEPRLVRSSGMRRDW
        MSLNCL+C +LQRTDS+R     +D   +  + +  F+   R+ S    +R+   G              HRR  S     +G   EP+LVRSSG+RRDW
Subjt:  MSLNCLSCQLLQRTDSER----HRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGVFRGMADNKVAPVCHRRAVS-----FGG-KEPRLVRSSGMRRDW

Query:  SFEDLRTIREE
        SFEDL+  +++
Subjt:  SFEDLRTIREE
AT5G46770.1 unknown protein9.2e-0838.33Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDR--------QIQTYY--TSDEFDPSQRSWSGNLSLR----QNRGGVFRGMADNKVAPVCHRRA----------VSFGGK
        MSLNCLSCQ L RTDS +  D         +I      T        R+WSGNLS R      R G        KV  + H R           V    +
Subjt:  MSLNCLSCQLLQRTDSERHRDR--------QIQTYY--TSDEFDPSQRSWSGNLSLR----QNRGGVFRGMADNKVAPVCHRRA----------VSFGGK

Query:  EPRLVRSSGMRRDWSFEDLR
        +P+LVRS+G+RR+WSFE+LR
Subjt:  EPRLVRSSGMRRDWSFEDLR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTGAATTGCCTCTCATGTCAACTCTTACAGAGAACCGATTCCGAGAGACACCGTGACCGGCAGATCCAAACTTACTATACCTCCGATGAGTTCGATCCCTCGCA
GAGAAGCTGGTCGGGGAACCTCTCTCTCCGTCAAAACAGAGGAGGAGTGTTTCGGGGCATGGCGGACAACAAGGTGGCTCCGGTGTGTCACCGGCGTGCCGTATCGTTCG
GTGGGAAGGAGCCGAGATTGGTTAGAAGCTCGGGGATGAGGAGGGATTGGAGCTTTGAGGATCTCAGAACTATTCGTGAGGAAAAGGAACCTTCCCCCAATTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATCCAATAAAAAGAAAGAAACCCTAAAATTAGAGAGTGGTTAAGCAAGAAATCCGTAGAACCAAAAAACGCAAAATCCCCAAATTTAAAACCCTAAAAATTTCATTTCTT
GAAATCAATCCCCAAAAAATCCTAATCCTAATCCTTCTCTCTCTCTCTCTCGCTTTCTCTCTCTCGCTCTCCCTCTCTCCCTCTCTCTCTCTCTCCCCCGTGTCTTCAAC
CATCAATCATGAGTCTGAATTGCCTCTCATGTCAACTCTTACAGAGAACCGATTCCGAGAGACACCGTGACCGGCAGATCCAAACTTACTATACCTCCGATGAGTTCGAT
CCCTCGCAGAGAAGCTGGTCGGGGAACCTCTCTCTCCGTCAAAACAGAGGAGGAGTGTTTCGGGGCATGGCGGACAACAAGGTGGCTCCGGTGTGTCACCGGCGTGCCGT
ATCGTTCGGTGGGAAGGAGCCGAGATTGGTTAGAAGCTCGGGGATGAGGAGGGATTGGAGCTTTGAGGATCTCAGAACTATTCGTGAGGAAAAGGAACCTTCCCCCAATT
CCTAACATTTAACCTCTTC
Protein sequenceShow/hide protein sequence
MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSLRQNRGGVFRGMADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIREEKEPSPNS