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IVF0003970 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003970
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description40S ribosomal protein S15a
Genome locationchr01:26479363..26479802
RNA-Seq ExpressionIVF0003970
SyntenyIVF0003970
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0042788 - polysomal ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000630 - Ribosomal protein S8
IPR035987 - Ribosomal protein S8 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9445325.1 hypothetical protein C3L33_22777, partial [Rhododendron williamsianum]3.45e-4171.96Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVGFGFIVLTTSAGIMEHAEARRKNVGG
        +D LKSMYNA  RGK+QVMI  SSKVIIKFLL            FV+DHRSGKIV E N RLNKCGVI+P FD  FGFIVLTTSAGIM+H EARRKNVGG
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVGFGFIVLTTSAGIMEHAEARRKNVGG

Query:  KVLSFFY
        KVL FFY
Subjt:  KVLSFFY

KAG5557696.1 hypothetical protein RHGRI_007820 [Rhododendron griersonianum]1.87e-4060.29Show/hide
Query:  EVLIWKEGESWSFDDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG------------
        +VL  K       +D LKSMYNA  RGK+QVMI  SSKVIIKFLL            FV+DHRSGKIV E N RLNKCGVI+P FDVG            
Subjt:  EVLIWKEGESWSFDDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG------------

Query:  ----FGFIVLTTSAGIMEHAEARRKNVGGKVLSFFY
            FGFIVLTTSAGIM+H EARRKNVGGKVL FFY
Subjt:  ----FGFIVLTTSAGIMEHAEARRKNVGGKVLSFFY

NP_190190.1 ribosomal protein S15A D [Arabidopsis thaliana]1.12e-4063.41Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +DGLKSMYNA  RGK+QVMI  SSKVIIKFL+            +V+DHRSGKIV E N RLNKCGVI+P FDVG                FGFIVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

XP_004144630.1 40S ribosomal protein S15a-1 [Cucumis sativus]1.58e-4064.23Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +D LKSMYNA  RGK+QVMI  SSKVIIKFLL            FV+DHRSGKIV E N RLNKCGVI+P FDVG                FGFIVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

XP_038706844.1 40S ribosomal protein S15a-1-like [Tripterygium wilfordii]1.58e-4061.79Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +D LK+MYNA  RGK+QVMI  SSKVIIKFLL            +V+DHR+GKIV E N RLNKCGVI+PCFDVG                FG+IVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

TrEMBL top hitse value%identityAlignment
A0A178VIE3 RPS15AD1.9e-3063.41Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +DGLKSMYNA  RGK+QVMI  SSKVIIKFL+            +V+DHRSGKIV E N RLNKCGVI+P FDVG                FGFIVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

A0A1S3CPB7 40S ribosomal protein S15a-12.5e-3064.23Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +D LKSMYNA  RGK+QVMI  SSKVIIKFLL            FV+DHRSGKIV E N RLNKCGVI+P FDVG                FGFIVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

A0A3N6S0C1 Uncharacterized protein8.6e-3162.6Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +D LKSMYNA  RGK+QVMI  SSKVIIKFL+            +V+DHRSGKIV E N RLNKCGVI+PCFDVG                FG+IVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

A0A5A7SSH5 40S ribosomal protein S15a-12.5e-3064.23Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +D LKSMYNA  RGK+QVMI  SSKVIIKFLL            FV+DHRSGKIV E N RLNKCGVI+P FDVG                FGFIVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

A0A6A4KFU8 Uncharacterized protein (Fragment)8.6e-3171.96Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVGFGFIVLTTSAGIMEHAEARRKNVGG
        +D LKSMYNA  RGK+QVMI  SSKVIIKFLL            FV+DHRSGKIV E N RLNKCGVI+P FD  FGFIVLTTSAGIM+H EARRKNVGG
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVGFGFIVLTTSAGIMEHAEARRKNVGG

Query:  KVLSFFY
        KVL FFY
Subjt:  KVLSFFY

SwissProt top hitse value%identityAlignment
O80646 40S ribosomal protein S15a-33.8e-2856.91Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +D LKSM NA  +GK+QVMI  SSKVIIKFL             +V+DHRSGKIV E N RLN CGVI+P +D+G                FG+IVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EAR+KNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

P42798 40S ribosomal protein S15a-15.7e-3261.79Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +D LKSMYNA  RGK+QVMI  SSKVIIKFL+            +V+DHRSGKIV E N RLNKCGVI+P FDVG                FG+IVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

Q00332 40S ribosomal protein S15a1.7e-3160.98Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +D LKSM+NA  RGK+QVMI  SSKVIIKFL+            +V+DHRSGKIV E N RLNKCGVI+P FDVG                FG+IVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

Q9AT34 40S ribosomal protein S15a2.2e-3160.16Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +D LKSM+NA  RGK+QVMI  SSKV+IKFL+            +V+DHRSGKIV E N RLNKCGVI+P FDVG                FG+IVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

Q9LX88 40S ribosomal protein S15a-45.2e-3363.41Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +DGLKSMYNA  RGK+QVMI  SSKVIIKFL+            +V+DHRSGKIV E N RLNKCGVI+P FDVG                FGFIVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

Arabidopsis top hitse value%identityAlignment
AT1G07770.1 ribosomal protein S15A4.1e-3361.79Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +D LKSMYNA  RGK+QVMI  SSKVIIKFL+            +V+DHRSGKIV E N RLNKCGVI+P FDVG                FG+IVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

AT1G07770.2 ribosomal protein S15A4.1e-3361.79Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +D LKSMYNA  RGK+QVMI  SSKVIIKFL+            +V+DHRSGKIV E N RLNKCGVI+P FDVG                FG+IVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

AT2G39590.1 Ribosomal protein S8 family protein2.7e-2956.91Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +D LKSM NA  +GK+QVMI  SSKVIIKFL             +V+DHRSGKIV E N RLN CGVI+P +D+G                FG+IVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EAR+KNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

AT3G46040.1 ribosomal protein S15A D3.7e-3463.41Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +DGLKSMYNA  RGK+QVMI  SSKVIIKFL+            +V+DHRSGKIV E N RLNKCGVI+P FDVG                FGFIVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY

AT5G59850.1 Ribosomal protein S8 family protein4.1e-3361.79Show/hide
Query:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS
        +D LKSMYNA  RGK+QVMI  SSKVIIKFL+            +V+DHRSGKIV E N RLNKCGVI+P FDVG                FG+IVLTTS
Subjt:  DDGLKSMYNANNRGKQQVMIMLSSKVIIKFLL------------FVNDHRSGKIVFEFNDRLNKCGVINPCFDVG----------------FGFIVLTTS

Query:  AGIMEHAEARRKNVGGKVLSFFY
        AGIM+H EARRKNVGGKVL FFY
Subjt:  AGIMEHAEARRKNVGGKVLSFFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCATCTTCCATTCAAAAATCCTTTGAAGTTTTAATTTGGAAGGAGGGTGAGAGTTGGTCTTTTGATGATGGTCTTAAGAGCATGTACAATGCAAATAACCGTGG
GAAACAACAGGTCATGATCATGTTGTCTTCCAAAGTTATCATCAAGTTTCTTCTGTTTGTCAATGATCATAGATCTGGAAAAATTGTTTTTGAATTCAACGATAGGCTGA
ACAAATGTGGGGTTATTAATCCTTGTTTTGACGTGGGTTTTGGATTCATTGTGTTGACAACTTCTGCTGGAATTATGGAACATGCAGAAGCAAGAAGGAAGAATGTTGGA
GGCAAAGTTCTTAGTTTCTTCTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCATCTTCCATTCAAAAATCCTTTGAAGTTTTAATTTGGAAGGAGGGTGAGAGTTGGTCTTTTGATGATGGTCTTAAGAGCATGTACAATGCAAATAACCGTGG
GAAACAACAGGTCATGATCATGTTGTCTTCCAAAGTTATCATCAAGTTTCTTCTGTTTGTCAATGATCATAGATCTGGAAAAATTGTTTTTGAATTCAACGATAGGCTGA
ACAAATGTGGGGTTATTAATCCTTGTTTTGACGTGGGTTTTGGATTCATTGTGTTGACAACTTCTGCTGGAATTATGGAACATGCAGAAGCAAGAAGGAAGAATGTTGGA
GGCAAAGTTCTTAGTTTCTTCTACTGA
Protein sequenceShow/hide protein sequence
MPPSSIQKSFEVLIWKEGESWSFDDGLKSMYNANNRGKQQVMIMLSSKVIIKFLLFVNDHRSGKIVFEFNDRLNKCGVINPCFDVGFGFIVLTTSAGIMEHAEARRKNVG
GKVLSFFY