; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0004017 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004017
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibonuclease H
Genome locationchr12:19167428..19168606
RNA-Seq ExpressionIVF0004017
SyntenyIVF0004017
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036934.1 uncharacterized protein E6C27_scaffold86G00070 [Cucumis melo var. makuwa]5.47e-27395.41Show/hide
Query:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
        MLVIHQVKEEWE RDAKLVPYSQYVTKLSQNFEKISFDHVPREDNR+ADALATLAVMFDLNLEFEL  IQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
Subjt:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC

Query:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
        REYPYEA ENDKRTIRRLA+NFFLSGEVLYKRNHDMVLLRCVD+E+AKQIMTDI+EGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
Subjt:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM

Query:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
        DKIHVAAS LHILSAPW FSLWGMDVIG IDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGV+LKFIKKELICRYGL EGIITDNAKNLNNKMMDELC
Subjt:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC

Query:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
        EQFKINHRNSTPYR KMN AVEAANKNIKRIIEKMTITY+DWHEMLPFALHGYRTSVRTSTGATPFSLVYGME VLPLEVEIPSLRVLMEAK
Subjt:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK

KAA0036943.1 uncharacterized protein E6C27_scaffold86G00190 [Cucumis melo var. makuwa]3.25e-27995.15Show/hide
Query:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
        MLVIHQVKEEWETRDAKLVPYSQYVTKLSQ FEKISFDHVPREDNR+ADALATLAVMFDLNLEFEL  IQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
Subjt:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC

Query:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
        REYPYEA ENDKRTIRRLA+NFFLSGEVLYKRNHDMVLLRCVD+E+AKQIMTDI+EGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
Subjt:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM

Query:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
        DKIHVAASSLHILSAPW FSLWGMDVIG IDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGV+LKFIKKELICRYGL EGIITDNAKNLNNKMMDELC
Subjt:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC

Query:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
        EQFKINHRNSTPYR KMN AVEAANKNIKRI+EKMTITY+DWHEMLPFALHGYRTSVRTST ATPFSLVYGME VLPLEVEIPSLRVLMEAK
Subjt:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK

KAA0054041.1 uncharacterized protein E6C27_scaffold318G001050 [Cucumis melo var. makuwa]1.05e-282100Show/hide
Query:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
        MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
Subjt:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC

Query:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
        REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
Subjt:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM

Query:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
        DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
Subjt:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC

Query:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
        EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
Subjt:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK

KAA0055609.1 uncharacterized protein E6C27_scaffold222G00930 [Cucumis melo var. makuwa]2.44e-26992.09Show/hide
Query:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
        MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKI FDHVPRE+N++ADALATLAVMFDLNLEFEL  IQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
Subjt:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC

Query:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
        REYPYEA ENDKR IRRL +NFFLSGEVLYKRNHDMVLLRCVD+E+AKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYAR+CKKCQIYM
Subjt:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM

Query:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
        DKIHVAAS LHI SA W FSLWGMDVIG+IDPKASNGH FILVAIDYFTKWIE ASYCNVTRGV+LKFIKKELICRYGL EGIIT+NAKNLNN+MMDEL 
Subjt:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC

Query:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
        EQFKINHRN TPYR KMNEAVEAANKNIKRIIEKMTITY+DWHEMLPFALHGYRTSVRTST ATPFS VYGME VLPLEVEIPSLRVLMEAK
Subjt:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK

TYJ96882.1 hypothetical protein E5676_scaffold10G00460 [Cucumis melo var. makuwa]1.28e-281100Show/hide
Query:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
        MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
Subjt:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC

Query:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
        REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
Subjt:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM

Query:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
        DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
Subjt:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC

Query:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
        EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
Subjt:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK

TrEMBL top hitse value%identityAlignment
A0A5A7T0A1 Ribonuclease H5.6e-22095.41Show/hide
Query:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
        MLVIHQVKEEWE RDAKLVPYSQYVTKLSQNFEKISFDHVPREDNR+ADALATLAVMFDLNLEFEL  IQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
Subjt:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC

Query:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
        REYPYEA ENDKRTIRRLA+NFFLSGEVLYKRNHDMVLLRCVD+E+AKQIMTDI+EGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
Subjt:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM

Query:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
        DKIHVAAS LHILSAPW FSLWGMDVIG IDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGV+LKFIKKELICRYGL EGIITDNAKNLNNKMMDELC
Subjt:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC

Query:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
        EQFKINHRNSTPYR KMN AVEAANKNIKRIIEKMTITY+DWHEMLPFALHGYRTSVRTSTGATPFSLVYGME VLPLEVEIPSLRVLMEAK
Subjt:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK

A0A5A7T1X2 Ribonuclease H1.6e-21995.15Show/hide
Query:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
        MLVIHQVKEEWETRDAKLVPYSQYVTKLSQ FEKISFDHVPREDNR+ADALATLAVMFDLNLEFEL  IQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
Subjt:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC

Query:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
        REYPYEA ENDKRTIRRLA+NFFLSGEVLYKRNHDMVLLRCVD+E+AKQIMTDI+EGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
Subjt:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM

Query:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
        DKIHVAASSLHILSAPW FSLWGMDVIG IDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGV+LKFIKKELICRYGL EGIITDNAKNLNNKMMDELC
Subjt:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC

Query:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
        EQFKINHRNSTPYR KMN AVEAANKNIKRI+EKMTITY+DWHEMLPFALHGYRTSVRTST ATPFSLVYGME VLPLEVEIPSLRVLMEAK
Subjt:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK

A0A5A7T7R4 Ribonuclease H2.9e-21693.88Show/hide
Query:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
        MLVIHQVKEEWETR AKLVPYSQYVTKLSQNFEKISFDHVPREDNR+ADALATLAVMFDLNLEFEL  IQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
Subjt:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC

Query:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
        REYPYEA ENDKRTIRRLA+NFFLSGEVLYKRNHDMVLLRCVD+E+AKQIM DIHEGIC THANGHMMARQILRS YYWTTMESDCIKY RECKKCQIYM
Subjt:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM

Query:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
        DKIHVAAS LHILSAPW FSLWGMDVIG IDPKASNGHRF LV+IDYFTKWIE AS+CNVTRGV+LKFIKKELICRYGL EGIITDNAKNLNNKMMDELC
Subjt:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC

Query:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
        EQFKINHRNSTPYR KMN AVEAANKNIKRIIEKMTITY+DWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
Subjt:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK

A0A5A7UKG2 Ribonuclease H1.6e-230100Show/hide
Query:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
        MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
Subjt:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC

Query:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
        REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
Subjt:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM

Query:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
        DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
Subjt:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC

Query:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
        EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
Subjt:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK

A0A5D3BAL8 Ribonuclease H1.6e-230100Show/hide
Query:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
        MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC
Subjt:  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC

Query:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
        REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM
Subjt:  REYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYM

Query:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
        DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC
Subjt:  DKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELC

Query:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
        EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
Subjt:  EQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK

SwissProt top hitse value%identityAlignment
P03355 Gag-Pol polyprotein3.7e-1130.66Show/hide
Query:  GHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMT
        G++++LV ID F+ WIEA      T  V+ K + +E+  R+G+ + + TDN     +K+   + +   I+ +    YR + +  VE  N+ IK  + K+T
Subjt:  GHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMT

Query:  IT--YQDWHEMLPFALHGYRTSVRTSTGATPFSLVYG
        +    +DW  +LP AL+  R +     G TP+ ++YG
Subjt:  IT--YQDWHEMLPFALHGYRTSVRTSTGATPFSLVYG

P03360 Gag-Pol polyprotein (Fragment)4.0e-1331.37Show/hide
Query:  WGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRSKMNEAV
        W +D    I   A  G++++LV +D F+ W+EA      T  V++K +  ++I R+GL   I +DN      K+  +LCE   ++ +    YR + +  V
Subjt:  WGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRSKMNEAV

Query:  EAANKNIKRIIEKMTI-TYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGME
        E  N+ +K  I K+ I T  DW  +LP AL   R +     G +PF ++YG++
Subjt:  EAANKNIKRIIEKMTI-TYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGME

P10273 Gag-Pol polyprotein2.0e-1226.52Show/hide
Query:  AKQIMTDIHEGICGTHANGHMMARQILR--SGYYWTTMESDCIKYARECKKC-QIYMDKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILV
        AK++++ +H+    TH +   M   + R  +G+Y    +    +    C+ C QI   KI            P +   W +D    I P    G++++LV
Subjt:  AKQIMTDIHEGICGTHANGHMMARQILR--SGYYWTTMESDCIKYARECKKC-QIYMDKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHRFILV

Query:  AIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTIT--YQD
         ID F+ W EA    + T  V+ K + +E+  RYG+ + + +DN     +++   +     IN +    YR + +  VE  N++IK  + K+T+    +D
Subjt:  AIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTIT--YQD

Query:  WHEMLPFALHGYRTSVRTSTGATPFSLVYG
        W  +LP  L+  R +     G TPF ++YG
Subjt:  WHEMLPFALHGYRTSVRTSTGATPFSLVYG

Q09575 Uncharacterized protein K02A2.62.9e-1125.59Show/hide
Query:  VDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQ--IYMDKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHR
        V K   K ++  +HEG       G +  +Q  RS  +W  ++SD     R C  CQ    M ++ V  +   +  APW      +D  G +     NG  
Subjt:  VDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQ--IYMDKIHVAASSLHILSAPWSFSLWGMDVIGAIDPKASNGHR

Query:  FILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITY
        ++LV +D  TK+ E     +++    +  + +E+   +G  E II+DN   L + +  ++C+   I H+ S  Y  + N A E     +KR I K+    
Subjt:  FILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITY

Query:  QDWHEMLPFALHGYRTSVRTS-TGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK
            ++L   L  YR +  ++  G+TP    +G +    + + +P+ RVL   K
Subjt:  QDWHEMLPFALHGYRTSVRTS-TGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK

Q8K259 Gypsy retrotransposon integrase-like protein 15.5e-1524.49Show/hide
Query:  IKQYIKCREYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLR--CVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYAR
        I  Y +  EY    L +++  IRR A  F    + L+    D    R   V +E+ K+++ + HE   G H +G      ++ SGYYWT++ +D  ++  
Subjt:  IKQYIKCREYPYEALENDKRTIRRLAINFFLSGEVLYKRNHDMVLLR--CVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYAR

Query:  ECKKCQIYMDKIHVAASS-LHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKN
         C+ CQ+  + + VA    L ++  PW  S+  +D++G     ++  H + ++  D FTKW+     C+V+   + K I   +   YG  + II D    
Subjt:  ECKKCQIYMDKIHVAASS-LHILSAPWSFSLWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKN

Query:  LNNKMMDELCEQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITY-QDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIP
           ++  EL   F       +     +N A E     IK  + K    +   W E LP     +  +       TP+  ++      P  +E P
Subjt:  LNNKMMDELCEQFKINHRNSTPYRSKMNEAVEAANKNIKRIIEKMTITY-QDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGTGATACATCAAGTCAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACAGCCAATATGTTACAAAATTGTCTCAAAATTTTGAGAAGATTTCATT
TGACCATGTTCCTAGGGAAGACAATCGAATAGCGGATGCATTAGCCACTCTGGCAGTGATGTTTGATCTTAATCTTGAATTTGAACTTCTTCAAATCCAAATTACAAAGC
GAGATGTGCCAGCATATTGCATGAATGTTGGAAATGATAACAAACCATGGTATTTTGACATTAAGCAATACATAAAGTGTAGAGAATATCCATATGAAGCTTTAGAGAAT
GACAAACGCACAATAAGGAGGTTGGCCATTAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGAAACCACGATATGGTGCTCCTTCGGTGTGTTGATAAAGAGAAAGC
AAAACAAATTATGACAGACATTCATGAAGGAATATGTGGAACACATGCTAATGGACATATGATGGCTAGACAAATACTTAGATCTGGTTATTATTGGACAACAATGGAAT
CGGACTGCATAAAATATGCAAGGGAATGTAAAAAGTGTCAAATTTATATGGATAAGATCCATGTAGCAGCATCTTCATTGCATATCTTGTCAGCACCATGGTCATTTTCT
TTATGGGGAATGGATGTTATTGGAGCCATTGATCCTAAAGCCTCAAATGGCCATCGTTTTATTCTTGTGGCCATTGATTACTTCACTAAATGGATAGAGGCTGCATCTTA
TTGCAATGTTACAAGGGGAGTAATGCTCAAGTTTATCAAGAAAGAGCTTATATGTCGTTATGGTCTCCTAGAGGGTATTATTACGGATAATGCCAAGAATCTTAATAACA
AAATGATGGATGAACTTTGTGAGCAGTTCAAGATCAATCACCGAAACTCGACTCCATATCGCTCAAAGATGAATGAAGCAGTTGAGGCAGCTAACAAAAATATTAAAAGA
ATCATTGAGAAAATGACAATAACATACCAAGATTGGCATGAAATGCTACCATTTGCGCTGCATGGATATCGCACCTCAGTTCGTACTTCAACAGGGGCCACACCATTTTC
TTTAGTTTATGGTATGGAAGCTGTCTTACCTTTAGAAGTTGAGATACCTTCATTGAGAGTTCTCATGGAAGCTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGTGATACATCAAGTCAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACAGCCAATATGTTACAAAATTGTCTCAAAATTTTGAGAAGATTTCATT
TGACCATGTTCCTAGGGAAGACAATCGAATAGCGGATGCATTAGCCACTCTGGCAGTGATGTTTGATCTTAATCTTGAATTTGAACTTCTTCAAATCCAAATTACAAAGC
GAGATGTGCCAGCATATTGCATGAATGTTGGAAATGATAACAAACCATGGTATTTTGACATTAAGCAATACATAAAGTGTAGAGAATATCCATATGAAGCTTTAGAGAAT
GACAAACGCACAATAAGGAGGTTGGCCATTAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGAAACCACGATATGGTGCTCCTTCGGTGTGTTGATAAAGAGAAAGC
AAAACAAATTATGACAGACATTCATGAAGGAATATGTGGAACACATGCTAATGGACATATGATGGCTAGACAAATACTTAGATCTGGTTATTATTGGACAACAATGGAAT
CGGACTGCATAAAATATGCAAGGGAATGTAAAAAGTGTCAAATTTATATGGATAAGATCCATGTAGCAGCATCTTCATTGCATATCTTGTCAGCACCATGGTCATTTTCT
TTATGGGGAATGGATGTTATTGGAGCCATTGATCCTAAAGCCTCAAATGGCCATCGTTTTATTCTTGTGGCCATTGATTACTTCACTAAATGGATAGAGGCTGCATCTTA
TTGCAATGTTACAAGGGGAGTAATGCTCAAGTTTATCAAGAAAGAGCTTATATGTCGTTATGGTCTCCTAGAGGGTATTATTACGGATAATGCCAAGAATCTTAATAACA
AAATGATGGATGAACTTTGTGAGCAGTTCAAGATCAATCACCGAAACTCGACTCCATATCGCTCAAAGATGAATGAAGCAGTTGAGGCAGCTAACAAAAATATTAAAAGA
ATCATTGAGAAAATGACAATAACATACCAAGATTGGCATGAAATGCTACCATTTGCGCTGCATGGATATCGCACCTCAGTTCGTACTTCAACAGGGGCCACACCATTTTC
TTTAGTTTATGGTATGGAAGCTGTCTTACCTTTAGAAGTTGAGATACCTTCATTGAGAGTTCTCATGGAAGCTAAGTAA
Protein sequenceShow/hide protein sequence
MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRIADALATLAVMFDLNLEFELLQIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEALEN
DKRTIRRLAINFFLSGEVLYKRNHDMVLLRCVDKEKAKQIMTDIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASSLHILSAPWSFS
LWGMDVIGAIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVMLKFIKKELICRYGLLEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRSKMNEAVEAANKNIKR
IIEKMTITYQDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPLEVEIPSLRVLMEAK