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IVF0004031 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004031
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionelongation factor P
Genome locationchr02:2974592..2977749
RNA-Seq ExpressionIVF0004031
SyntenyIVF0004031
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR013852 - Translation elongation factor P/YeiP, conserved site
IPR015365 - Elongation factor P, C-terminal
IPR020599 - Translation elongation factor P/YeiP


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451020.1 PREDICTED: elongation factor P [Cucumis melo]8.28e-40100Show/hide
Query:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
Subjt:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

XP_022147597.1 uncharacterized protein LOC111016484 isoform X2 [Momordica charantia]3.90e-3893.06Show/hide
Query:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        MVQLFNDTPLSASVPKRVTCVV EAQPPMKGIAATPKEKKA+LDNGMTIKVPPH+V+GDV+VINTEDDSYIE
Subjt:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

XP_022968100.1 uncharacterized protein LOC111467432 [Cucurbita maxima]9.22e-3893.06Show/hide
Query:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        MVQLFNDTPLSASVPKRVTCVV EAQPPMKGIAATPKEKKA+LDNGMT+KVPPH+VVGDV+VINTEDDSYIE
Subjt:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

XP_023529869.1 uncharacterized protein LOC111792589 [Cucurbita pepo subsp. pepo]9.22e-3893.06Show/hide
Query:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        MVQLFNDTPLSASVPKRVTCVV EAQPPMKGIAATPKEKKA+LDNGMT+KVPPH+VVGDV+VINTEDDSYIE
Subjt:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

XP_038879927.1 elongation factor P [Benincasa hispida]1.29e-3895.83Show/hide
Query:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        MVQLFNDTPLSASVPKRVTCVV EAQPPMKGIAATPKEKKALLDNGMTIKVPPH+VVGDV+VINTEDDSYIE
Subjt:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

TrEMBL top hitse value%identityAlignment
A0A1S3BRA6 elongation factor P3.4e-31100Show/hide
Query:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
Subjt:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

A0A6J1D2T1 uncharacterized protein LOC111016484 isoform X28.4e-3093.06Show/hide
Query:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        MVQLFNDTPLSASVPKRVTCVV EAQPPMKGIAATPKEKKA+LDNGMTIKVPPH+V+GDV+VINTEDDSYIE
Subjt:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

A0A6J1D2U9 uncharacterized protein LOC111016484 isoform X13.5e-2889.33Show/hide
Query:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTI---KVPPHIVVGDVIVINTEDDSYIE
        MVQLFNDTPLSASVPKRVTCVV EAQPPMKGIAATPKEKKA+LDNGMTI   KVPPH+V+GDV+VINTEDDSYIE
Subjt:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTI---KVPPHIVVGDVIVINTEDDSYIE

A0A6J1F612 uncharacterized protein LOC1114411524.2e-2991.67Show/hide
Query:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        MVQLFNDTPLSASVPKRVTCVV EAQPPMKGIAA PKEKKA+LDNGMT+KVPPH+VVGDV+VINTEDDSYIE
Subjt:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

A0A6J1HW84 uncharacterized protein LOC1114674321.1e-2993.06Show/hide
Query:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        MVQLFNDTPLSASVPKRVTCVV EAQPPMKGIAATPKEKKA+LDNGMT+KVPPH+VVGDV+VINTEDDSYIE
Subjt:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

SwissProt top hitse value%identityAlignment
B6INP2 Elongation factor P1.4e-1044.44Show/hide
Query:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        +VQ F   PLS  +P+ VT  + EA P +KG  A+   K A+L+NG+ + VPPH+  G  IV+N ED +Y+E
Subjt:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

B8IS61 Elongation factor P1.4e-1047.22Show/hide
Query:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        M+ L N  PL+  +P+RVT  VTE +P  KG  A+   K A L NG+  +VPPHI  G  +VI T D SY+E
Subjt:  MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

B9KKM5 Elongation factor P1.1e-1046.48Show/hide
Query:  VQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        +Q  ND  +S   P++VT  +TE +P +KG  A+   K A+  NG+ + VPPHI  G  IVINTED SY+E
Subjt:  VQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

Q0BXH7 Elongation factor P6.4e-1143.66Show/hide
Query:  VQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        +Q+FN  P+S ++P R T  + E +P +KG  A+   K A+L+NG+ I VP H+ VG  ++INTED +Y+E
Subjt:  VQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

Q92IU8 Elongation factor P4.2e-1039.44Show/hide
Query:  VQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE
        V+ +ND PL+  +P  V   ++E  P +KG  AT   K A+L+NG+ +KVP ++ +G+ IV+ T+D +Y+E
Subjt:  VQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIE

Arabidopsis top hitse value%identityAlignment
AT4G26310.1 elongation factor P (EF-P) family protein5.0e-1954.67Show/hide
Query:  VQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIESDRK
        +QL++   LSAS+PK +TC V E Q PMKG+ + P+ K+ALLDNG TI+VP ++  G+ IVINTEDDS+++ D K
Subjt:  VQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIESDRK

AT4G26310.2 elongation factor P (EF-P) family protein4.3e-1055.1Show/hide
Query:  VQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIK
        +QL++   LSAS+PK +TC V E Q PMKG+ + P+ K+ALLDNG TI+
Subjt:  VQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACAGCTTTTCAATGACACTCCCTTGTCTGCATCGGTTCCCAAACGAGTGACATGTGTTGTGACGGAAGCACAACCACCTATGAAAGGAATTGCAGCTACTCCCAA
GGAAAAGAAGGCATTACTGGACAATGGTATGACAATAAAAGTACCACCACACATCGTTGTAGGAGACGTGATAGTGATTAATACAGAGGATGACTCTTATATTGAGAGCG
ATAGAAAAGTGAGTCTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTACAGCTTTTCAATGACACTCCCTTGTCTGCATCGGTTCCCAAACGAGTGACATGTGTTGTGACGGAAGCACAACCACCTATGAAAGGAATTGCAGCTACTCCCAA
GGAAAAGAAGGCATTACTGGACAATGGTATGACAATAAAAGTACCACCACACATCGTTGTAGGAGACGTGATAGTGATTAATACAGAGGATGACTCTTATATTGAGAGCG
ATAGAAAAGTGAGTCTCATTTGA
Protein sequenceShow/hide protein sequence
MVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIVVGDVIVINTEDDSYIESDRKVSLI