; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0004060 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004060
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationchr02:5183311..5188398
RNA-Seq ExpressionIVF0004060
SyntenyIVF0004060
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0010262 - somatic embryogenesis (biological process)
GO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0055046 - microgametogenesis (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139033.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus]2.17e-18096.65Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKHSDKV+ES YRLNDGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE

XP_008450422.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]2.26e-187100Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE

XP_008450423.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]1.05e-187100Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE

XP_022154358.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia]9.97e-16689.3Show/hide
Query:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTR
        MQSKSETNNQL  DPNGAPSTS+YYEPWWRG+GYN  PLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR D +
Subjt:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTR

Query:  KMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSSTLPAMHGEC TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK EA+  E HSDK +ESGY LNDGSEQ+ GSS MNKAS+
Subjt:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE

XP_038879324.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]6.01e-17795.17Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKK+E DGK    DKV+ESGYRLN+GSEQQ GSSL N+ASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE

TrEMBL top hitse value%identityAlignment
A0A0A0M2S3 Nuclear transcription factor Y subunit2.3e-14096.65Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKHSDKV+ES YRLNDGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE

A0A1S3BP85 Nuclear transcription factor Y subunit6.3e-146100Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE

A0A1S3BPV3 Nuclear transcription factor Y subunit6.3e-146100Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE

A0A5D3D5Q2 Nuclear transcription factor Y subunit6.3e-146100Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE

A0A6J1DK42 Nuclear transcription factor Y subunit3.1e-12989.3Show/hide
Query:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTR
        MQSKSETNNQL  DPNGAPSTS+YYEPWWRG+GYN  PLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR D +
Subjt:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTR

Query:  KMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSSTLPAMHGEC TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK EA+  E HSDK +ESGY LNDGSEQ+ GSS MNKAS+
Subjt:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-71.2e-2141.24Show/hide
Query:  GSYRQDTRKMQHVSSTLP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGGPHARMPLPIEIAQDPVFVNAKQYQGI
        GS+ +  ++  H    +P A + E +  S      G  +S+A    PY DPYY  + A       G    ++G     +PLP +  ++PVFVNAKQY GI
Subjt:  GSYRQDTRKMQHVSSTLP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGGPHARMPLPIEIAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSS
        LRRRQ+RA+ E++ K IK+RKPYLHESRH HAIRR R  GGRF    + D  E H D   E    L+ G      SS
Subjt:  LRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSS

Q8VY64 Nuclear transcription factor Y subunit A-47.2e-2244.37Show/hide
Query:  TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLH
        T S   E + H +     PY DPYY  + A   + P  YP     ++G     +PL  +  ++PVFVNAKQY GILRRRQ+RAK EA  ++IKA+KPY+H
Subjt:  TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLH

Query:  ESRHQHAIRRSRSSGGRF--AKKSEADGKEKHSDKVSESGYRLNDGSEQQK
        ESRH HAIRR R  GGRF  AKK   D KE+      E+    +     +K
Subjt:  ESRHQHAIRRSRSSGGRF--AKKSEADGKEKHSDKVSESGYRLNDGSEQQK

Q93ZH2 Nuclear transcription factor Y subunit A-31.3e-1834.71Show/hide
Query:  MGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQ-------STQLE
        + +   P   V     S+ SL       +S  G   +   ++ ++ D S   Q+TG  ++  +   D    + +S    A  G  +TQ         Q  
Subjt:  MGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQ-------STQLE

Query:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGGPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHE
        + G    H     +N    Y DP+YGG++A  +    P   P MV     R+PLP E+ + DPVFVNAKQY  I+RRRQ RAK EA+ K I+ARKPYLHE
Subjt:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGGPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHE

Query:  SRHQHAIRRSRSSGGRF-------AKKSEADGKEKHSDKVSE
        SRH HA++R R SGGRF        +  +A  +E+  DK+ +
Subjt:  SRHQHAIRRSRSSGGRF-------AKKSEADGKEKHSDKVSE

Q945M9 Nuclear transcription factor Y subunit A-91.9e-4649.6Show/hide
Query:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N++D   +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DTRKMQHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          ++  H   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DTRKMQHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVS
        KAE EKK IK+RKPYLHESRHQHA+RR R +GGRFAKK+  +  ++ +++ S
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVS

Q9LXV5 Nuclear transcription factor Y subunit A-16.2e-5048.13Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  TRKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  TRKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLN-DGSEQQKGSS
        E E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE +  E    +  E G   N  GSEQ +  S
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLN-DGSEQQKGSS

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A91.3e-4749.6Show/hide
Query:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N++D   +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DTRKMQHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          ++  H   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DTRKMQHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVS
        KAE EKK IK+RKPYLHESRHQHA+RR R +GGRFAKK+  +  ++ +++ S
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVS

AT5G12840.1 nuclear factor Y, subunit A14.4e-5148.13Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  TRKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  TRKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLN-DGSEQQKGSS
        E E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE +  E    +  E G   N  GSEQ +  S
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLN-DGSEQQKGSS

AT5G12840.2 nuclear factor Y, subunit A12.6e-5149.26Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  TRKMQHVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
           M+     L    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARA
Subjt:  TRKMQHVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLN-DGSEQQKGSS
        KAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE +  E    +  E G   N  GSEQ +  S
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLN-DGSEQQKGSS

AT5G12840.3 nuclear factor Y, subunit A14.4e-5148.13Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  TRKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  TRKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLN-DGSEQQKGSS
        E E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE +  E    +  E G   N  GSEQ +  S
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLN-DGSEQQKGSS

AT5G12840.4 nuclear factor Y, subunit A12.6e-5149.26Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  TRKMQHVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
           M+     L    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARA
Subjt:  TRKMQHVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLN-DGSEQQKGSS
        KAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE +  E    +  E G   N  GSEQ +  S
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVSESGYRLN-DGSEQQKGSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAGTCTGAAACCAATAATCAGCTCGATCCAAACGGTGCACCATCGACGAGTATCTATTATGAACCCTGGTGGCGTGGCATGGGGTACAATACTTTTCCATT
ACCTGTGGTTGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCGAATGGTGGTTCAGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAATGATGAAG
AAGATGATGTTTCTAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACAGGATACTCGGAAGATGCAGCATGTTTCGTCCACTTTGCCAGCTATG
CACGGTGAATGTCTGACGCAGTCTACACAACTCGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCTTATCAGGATCCATATTATGGAGGAATGATGGCCTTCTA
TGGTCATCAGCCCTTGGGCTATCCCATGGTTGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTTGTGAATGCAAAGCAATACCAGG
GAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAATCGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCATAAGAAGG
TCGAGAAGTAGTGGAGGCCGTTTTGCAAAGAAAAGCGAAGCTGACGGAAAAGAAAAGCATTCTGATAAAGTAAGTGAGAGTGGTTACCGCCTAAATGACGGTTCTGAACA
GCAGAAAGGAAGCTCCTTGATGAACAAGGCCTCTGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATAGAGTCTTCTTACTTCCAATTTTTCATTTTTGGAATTCACCAAAAACTGGATTAAATTTCAATCTCCCTCTTTTTTCCTTTCCCTTTTTCTATCCTTTTTTTTTCCTT
CCTTTCATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTCTTCAATCTTCATTCTTATTTTTTAATTCTCTCCCATTTCCCTTCTCCCCCAT
CACATTTTTCCCTTCTCTTCATTTCCACCTTGCTCCAATTCCTTCCGAGGGTTGAAGGTATGCAGTCAAAGTCTGAAACCAATAATCAGCTCGATCCAAACGGTGCACCA
TCGACGAGTATCTATTATGAACCCTGGTGGCGTGGCATGGGGTACAATACTTTTCCATTACCTGTGGTTGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCGAA
TGGTGGTTCAGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAATGATGAAGAAGATGATGTTTCTAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCGG
GAAGCTACAGACAGGATACTCGGAAGATGCAGCATGTTTCGTCCACTTTGCCAGCTATGCACGGTGAATGTCTGACGCAGTCTACACAACTCGAACTTGTTGGTCACTCT
ATTGCTTGTGCATCAAATCCTTATCAGGATCCATATTATGGAGGAATGATGGCCTTCTATGGTCATCAGCCCTTGGGCTATCCCATGGTTGGAGGACCACATGCTAGAAT
GCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTTGTGAATGCAAAGCAATACCAGGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAAT
CGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCATAAGAAGGTCGAGAAGTAGTGGAGGCCGTTTTGCAAAGAAAAGCGAAGCTGACGGAAAA
GAAAAGCATTCTGATAAAGTAAGTGAGAGTGGTTACCGCCTAAATGACGGTTCTGAACAGCAGAAAGGAAGCTCCTTGATGAACAAGGCCTCTGAGTAGCAAGGCAACCT
GCACTGAATGCCAAGACAATGGCCTGAATTGTTCAGTGGGGAGTAAGGGATCGATTGCTTGTTTGTTAAAAAGTACCGAGTTCCTAGCAAAGCATGCTAGGCGGCAAATC
ATTCTTGGCTTTGTTGTTCTGTTGCTTTGTAGAAAAAGAAAAAGGGATGGTGAATGACATGTGACTTATAGGATCTCGTGGCTTCTTCAAAGGATTCCTCAAAAGTCTAA
GAGATTTCTTCATTCGATTCTCTTTTTTTGCCTTTTTTGTACAGAGTTTATGATGACGTAAGGGAGTGGGAACTTGGGTCTCTTGTATTATATTAGCAGAGCGTGAAACT
AAATGAATCATAAGGCTTAGGATAGATATAGTGATTGTGATTCATAAAGCTTAGACTTTAAAGATTTTAGATTTGAGTATCTAAAGTTTGACGGATTATTGATGCAAATC
ATA
Protein sequenceShow/hide protein sequence
MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAM
HGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRR
SRSSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE