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IVF0004078 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004078
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr12:19706830..19707120
RNA-Seq ExpressionIVF0004078
SyntenyIVF0004078
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053994.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.57e-65100Show/hide
Query:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV
        MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV
Subjt:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV

KAA0061098.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.02e-4979.17Show/hide
Query:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV
        +EIPLSEGK+AWVLQS IH+EA NS R LT GQ LIEGQT WG VTKV GEFCF DCYWEWLEL VGRN RLLY+ HLY  +TASLYTYDRNNDVV
Subjt:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV

TYK04205.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.86e-5081.25Show/hide
Query:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV
        ++IPLS GK AWVLQSSIHNEA NSDR LTLGQ LIEGQTRWG +TKV GEF F DCYW+WLEL VGRNARLLY+AHLY V+TASLYTYDRN DVV
Subjt:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV

TYK21765.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.29e-5284.21Show/hide
Query:  EIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV
        EIPLSEGKNAWVLQSSIHNEALNS R LTLGQ LIEGQTRWG VTKV GEFCF DCYWEWLEL VGRN RLLY+  LY V+T SLYTYDRN+DVV
Subjt:  EIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV

XP_008442010.1 PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo]1.97e-4879.79Show/hide
Query:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNND
        +EIPL EGK AWVLQSSIHNE  NSDRVLTLGQHLIEGQTRWG +TKV  EFCF DCYWEWLEL VGRNARLLY+A LY V+T   YTYDRN+D
Subjt:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNND

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein1.7e-4083.33Show/hide
Query:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV
        +E+PLSEGK+AWVLQSSIHNEA NS R LTLGQ LIEGQTRWG VTKV GEFCF DCYWEWLEL VGRN RLLY+ HLYSV+TASLYTYDRN+DVV
Subjt:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV

A0A5A7TX42 Uncharacterized protein1.2e-3880.21Show/hide
Query:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV
        +E+PLSEGK+AWVLQSSIHNEA NS R LTLGQ LIEGQTRWG VTKV GEFCF DCYWEWLEL VGRN RLLY+  LY  +TASLYTYDRN+DVV
Subjt:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV

A0A5A7UFM1 Putative mitochondrial protein4.3e-49100Show/hide
Query:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV
        MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV
Subjt:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV

A0A5D3D7V4 PMD domain-containing protein1.7e-4083.33Show/hide
Query:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV
        +E+PLSEGK+AWVLQSSIHNEA NS R LTLGQ LIEGQTRWG VTKV GEFCF DCYWEWLEL VGRN RLLY+ HLYSV+TASLYTYDRN+DVV
Subjt:  MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV

A0A5D3DE12 Putative mitochondrial protein6.3e-4084.21Show/hide
Query:  EIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV
        EIPLSEGKNAWVLQSSIHNEALNS R LTLGQ LIEGQTRWG VTKV GEFCF DCYWEWLEL VGRN RLLY+  LY V+T SLYTYDRN+DVV
Subjt:  EIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATACCTTTGTCTGAGGGAAAAAACGCATGGGTCTTACAGTCTTCTATCCATAACGAGGCTCTTAATTCCGACAGAGTTCTCACTCTCGGACAACATTTAATTGA
AGGCCAAACACGTTGGGGTGTTGTGACCAAGGTCCTTGGAGAGTTCTGTTTTGCTGACTGCTATTGGGAGTGGCTAGAGCTTGCAGTTGGTCGAAATGCGCGACTTCTTT
ACAATGCTCATTTATATAGCGTCATAACAGCTTCTTTGTACACTTATGATCGTAATAATGATGTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATACCTTTGTCTGAGGGAAAAAACGCATGGGTCTTACAGTCTTCTATCCATAACGAGGCTCTTAATTCCGACAGAGTTCTCACTCTCGGACAACATTTAATTGA
AGGCCAAACACGTTGGGGTGTTGTGACCAAGGTCCTTGGAGAGTTCTGTTTTGCTGACTGCTATTGGGAGTGGCTAGAGCTTGCAGTTGGTCGAAATGCGCGACTTCTTT
ACAATGCTCATTTATATAGCGTCATAACAGCTTCTTTGTACACTTATGATCGTAATAATGATGTTGTTTGA
Protein sequenceShow/hide protein sequence
MEIPLSEGKNAWVLQSSIHNEALNSDRVLTLGQHLIEGQTRWGVVTKVLGEFCFADCYWEWLELAVGRNARLLYNAHLYSVITASLYTYDRNNDVV