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IVF0004113 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004113
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr08:17042825..17043110
RNA-Seq ExpressionIVF0004113
SyntenyIVF0004113
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035756.1 gag/pol protein [Cucumis melo var. makuwa]3.24e-2398.11Show/hide
Query:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
        MGKGKEVEANIAT EKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
Subjt:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
KAA0045181.1 gag/pol protein [Cucumis melo var. makuwa]3.26e-2192.45Show/hide
Query:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
        MGKGKEVEAN+ATTEKELV GSSSKTRVGPSQIKKK KGK PKNSKGKKVAKG
Subjt:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
KAA0054225.1 gag/pol protein [Cucumis melo var. makuwa]7.16e-2090.38Show/hide
Query:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAK
        MGK KEVEAN+ATTEKELVGGSSSKTRVGPSQ+KKK KGKTPKN KGKKVAK
Subjt:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAK
TYK08781.1 gag/pol protein [Cucumis melo var. makuwa]4.94e-1983.02Show/hide
Query:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
        MGKGK+VEAN+ T +KELVGGSSSKTRVGPSQ+KKK KGK PKNSKGKKV KG
Subjt:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
TYK29862.1 gag/pol protein [Cucumis melo var. makuwa]4.03e-24100Show/hide
Query:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
        MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
Subjt:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
TrEMBL top hitse value%identityAlignment
A0A5A7T0L9 Gag/pol protein1.1e-1698.11Show/hide
Query:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
        MGKGKEVEANIAT EKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
Subjt:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
A0A5A7TUI5 Gag/pol protein7.7e-1592.45Show/hide
Query:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
        MGKGKEVEAN+ATTEKELV GSSSKTRVGPSQIKKK KGK PKNSKGKKVAKG
Subjt:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
A0A5D3CA75 Gag/pol protein4.2e-1383.02Show/hide
Query:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
        MGKGK+VEAN+ T +KELVGGSSSKTRVGPSQ+KKK KGK PKNSKGKKV KG
Subjt:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
A0A5D3CUE8 Gag/pol protein1.1e-1390.38Show/hide
Query:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAK
        MGK KEVEAN+ATTEKELVGGSSSKTRVGPSQ+KKK KGKTPKN KGKKVAK
Subjt:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAK
A0A5D3E1U5 Gag/pol protein2.2e-17100Show/hide
Query:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
        MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
Subjt:  MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAGGGGAAGGAAGTGGAAGCAAATATTGCTACCACAGAGAAAGAGTTAGTGGGAGGATCGTCCTCTAAGACTAGAGTTGGACCTTCACAAATAAAGAAGAAGGG
AAAGGGGAAGACTCCCAAGAATAGTAAGGGAAAGAAAGTTGCTAAAGGAATTGTCCAGAGTACCTTGCTGAAAAGAAAGCTGAGAAGGAAGCACAAGGTAAATATGATTT
ACTTGCTATTGAAACATGCTTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAAGGGGAAGGAAGTGGAAGCAAATATTGCTACCACAGAGAAAGAGTTAGTGGGAGGATCGTCCTCTAAGACTAGAGTTGGACCTTCACAAATAAAGAAGAAGGG
AAAGGGGAAGACTCCCAAGAATAGTAAGGGAAAGAAAGTTGCTAAAGGAATTGTCCAGAGTACCTTGCTGAAAAGAAAGCTGAGAAGGAAGCACAAGGTAAATATGATTT
ACTTGCTATTGAAACATGCTTATTAG
Protein sequenceShow/hide protein sequence
MGKGKEVEANIATTEKELVGGSSSKTRVGPSQIKKKGKGKTPKNSKGKKVAKGIVQSTLLKRKLRRKHKVNMIYLLLKHAY