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IVF0004125 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004125
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent helicase ATRX
Genome locationchr05:15246838..15257546
RNA-Seq ExpressionIVF0004125
SyntenyIVF0004125
Gene Ontology termsGO:0000781 - chromosome, telomeric region (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR044574 - ATPase ARIP4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441780.1 PREDICTED: protein CHROMATIN REMODELING 20 isoform X1 [Cucumis melo]7.04e-8991.18Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG--------------SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG              SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG--------------SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDE+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

XP_008441784.1 PREDICTED: protein CHROMATIN REMODELING 20 isoform X2 [Cucumis melo]6.93e-8991.18Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG--------------SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG              SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG--------------SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDE+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

XP_008441785.1 PREDICTED: protein CHROMATIN REMODELING 20 isoform X3 [Cucumis melo]6.86e-8991.18Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG--------------SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG              SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG--------------SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDE+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

XP_008441786.1 PREDICTED: protein CHROMATIN REMODELING 20 isoform X4 [Cucumis melo]5.06e-8991.18Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG--------------SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG              SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG--------------SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDE+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

XP_008441788.1 PREDICTED: protein CHROMATIN REMODELING 20 isoform X5 [Cucumis melo]4.87e-8991.18Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG--------------SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG              SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNG--------------SQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDE+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

TrEMBL top hitse value%identityAlignment
A0A1S3B484 ATP-dependent helicase ATRX3.2e-7691.18Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN              GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDE+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

A0A1S3B498 ATP-dependent helicase ATRX3.2e-7691.18Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN              GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDE+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

A0A1S3B4W2 ATP-dependent helicase ATRX3.2e-7691.18Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN              GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDE+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

A0A1S3B4Z9 ATP-dependent helicase ATRX3.2e-7691.18Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN              GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDE+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

A0A1S3B502 ATP-dependent helicase ATRX3.2e-7691.18Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN              GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDE+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

SwissProt top hitse value%identityAlignment
F4HW51 Protein CHROMATIN REMODELING 201.1e-4659.41Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        M TF +EWE  LDELE ESA LLEQLDGAGIELP LY++IESQA N              G+QVT + + S+++AE+ L   RPVR+RHGKLLEEGASG+
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        L+KK +   ++       E+DWSSLNKVFSE  +D  + FGSK WASVYLASTP QAA MGLEFPGV+E+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

Arabidopsis top hitse value%identityAlignment
AT1G08600.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein8.0e-4859.41Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        M TF +EWE  LDELE ESA LLEQLDGAGIELP LY++IESQA N              G+QVT + + S+++AE+ L   RPVR+RHGKLLEEGASG+
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        L+KK +   ++       E+DWSSLNKVFSE  +D  + FGSK WASVYLASTP QAA MGLEFPGV+E+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

AT1G08600.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein8.0e-4859.41Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        M TF +EWE  LDELE ESA LLEQLDGAGIELP LY++IESQA N              G+QVT + + S+++AE+ L   RPVR+RHGKLLEEGASG+
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        L+KK +   ++       E+DWSSLNKVFSE  +D  + FGSK WASVYLASTP QAA MGLEFPGV+E+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

AT1G08600.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein8.0e-4859.41Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        M TF +EWE  LDELE ESA LLEQLDGAGIELP LY++IESQA N              G+QVT + + S+++AE+ L   RPVR+RHGKLLEEGASG+
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        L+KK +   ++       E+DWSSLNKVFSE  +D  + FGSK WASVYLASTP QAA MGLEFPGV+E+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL

AT1G08600.4 P-loop containing nucleoside triphosphate hydrolases superfamily protein8.0e-4859.41Show/hide
Query:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY
        M TF +EWE  LDELE ESA LLEQLDGAGIELP LY++IESQA N              G+QVT + + S+++AE+ L   RPVR+RHGKLLEEGASG+
Subjt:  MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASN--------------GSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGY

Query:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL
        L+KK +   ++       E+DWSSLNKVFSE  +D  + FGSK WASVYLASTP QAA MGLEFPGV+E+
Subjt:  LQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTTTCGTAGAGGAGTGGGAGATTGTGCTCGATGAGCTTGAGATTGAGAGTGCTCATTTGTTGGAGCAACTTGATGGTGCTGGTATTGAGCTGCCAAGTCTCTA
CAAGCTAATTGAAAGTCAAGCTTCGAATGGGTCTCAGGTAACTGGTGATCTTCTTGCATCTGTATCTGACGCAGAGAAGACCCTCCAAATCGAAAGGCCTGTAAGGAGAC
GACATGGGAAACTGTTGGAGGAGGGAGCAAGTGGATATCTGCAGAAGAAATTTTCCACTAACCAGATTGAGGGAATCGGAACAGAAAAATTGGAAGTTGATTGGAGCTCT
CTTAATAAGGTTTTTTCAGAAGGCTCAAAGGACAGTGACATGTTGTTTGGCAGCAAGAACTGGGCTTCTGTTTACTTGGCTAGCACTCCGCAACAAGCTGCAGAAATGGG
ACTCGAATTTCCTGGAGTTGATGAGCTAAACAATTGCAGATATCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTTTCGTAGAGGAGTGGGAGATTGTGCTCGATGAGCTTGAGATTGAGAGTGCTCATTTGTTGGAGCAACTTGATGGTGCTGGTATTGAGCTGCCAAGTCTCTA
CAAGCTAATTGAAAGTCAAGCTTCGAATGGGTCTCAGGTAACTGGTGATCTTCTTGCATCTGTATCTGACGCAGAGAAGACCCTCCAAATCGAAAGGCCTGTAAGGAGAC
GACATGGGAAACTGTTGGAGGAGGGAGCAAGTGGATATCTGCAGAAGAAATTTTCCACTAACCAGATTGAGGGAATCGGAACAGAAAAATTGGAAGTTGATTGGAGCTCT
CTTAATAAGGTTTTTTCAGAAGGCTCAAAGGACAGTGACATGTTGTTTGGCAGCAAGAACTGGGCTTCTGTTTACTTGGCTAGCACTCCGCAACAAGCTGCAGAAATGGG
ACTCGAATTTCCTGGAGTTGATGAGCTAAACAATTGCAGATATCTTTAA
Protein sequenceShow/hide protein sequence
MATFVEEWEIVLDELEIESAHLLEQLDGAGIELPSLYKLIESQASNGSQVTGDLLASVSDAEKTLQIERPVRRRHGKLLEEGASGYLQKKFSTNQIEGIGTEKLEVDWSS
LNKVFSEGSKDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDELNNCRYL