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IVF0004138 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004138
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description40S ribosomal protein S30
Genome locationchr10:21889249..21889574
RNA-Seq ExpressionIVF0004138
SyntenyIVF0004138
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR006846 - Ribosomal protein S30


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032460.1 40S ribosomal protein S30-like [Cucumis melo var. makuwa]2.36e-34100Show/hide
Query:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
Subjt:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK

RWW18752.1 hypothetical protein GW17_00017242 [Ensete ventricosum]7.12e-3078.95Show/hide
Query:  MFLIYLFLHLCNLHSGKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        +FL+  F    NL SGKVHGS ARA KVRGQTPKVAKQDKKKKPRG A+KRMQYNRRFVTAVVGF KKRGP S EK
Subjt:  MFLIYLFLHLCNLHSGKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK

RZR96505.1 hypothetical protein BHM03_00025534, partial [Ensete ventricosum]5.03e-3078.95Show/hide
Query:  MFLIYLFLHLCNLHSGKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        +FL+  F    NL SGKVHGS ARA KVRGQTPKVAKQDKKKKPRG A+KRMQYNRRFVTAVVGF KKRGP S EK
Subjt:  MFLIYLFLHLCNLHSGKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK

XP_008453058.1 PREDICTED: 40S ribosomal protein S30-like [Cucumis melo]1.65e-34100Show/hide
Query:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
Subjt:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK

XP_038692446.1 40S ribosomal protein S30-like [Tripterygium wilfordii]6.25e-3091.8Show/hide
Query:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        GKVHGS ARA KVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGF KKRGP S EK
Subjt:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK

TrEMBL top hitse value%identityAlignment
A0A1S3BVA2 40S ribosomal protein S304.5e-25100Show/hide
Query:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
Subjt:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK

A0A444F7Y5 40S ribosomal protein S301.0e-2178.95Show/hide
Query:  MFLIYLFLHLCNLHSGKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        +FL+  F    NL SGKVHGS ARA KVRGQTPKVAKQDKKKKPRG A+KRMQYNRRFVTAVVGF KKRGP S EK
Subjt:  MFLIYLFLHLCNLHSGKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK

A0A5A7SNT1 40S ribosomal protein S304.5e-25100Show/hide
Query:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
Subjt:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK

A0A5N5NRR1 Uncharacterized protein1.8e-2189.06Show/hide
Query:  LHSGKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        L SGKVHGS ARA KVRGQTPKVAKQDKKKKPRG AHKRMQYNRRFVTAVVGF KKRGP S EK
Subjt:  LHSGKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK

K3Y2S3 40S ribosomal protein S302.3e-2186.15Show/hide
Query:  NLHSGKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        +L +GKVHGS ARA KVRGQTPKVAKQDKKKKPRG AHKRMQYNRRFVTAVVGF KKRGP S EK
Subjt:  NLHSGKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK

SwissProt top hitse value%identityAlignment
P49689 40S ribosomal protein S302.6e-2286.89Show/hide
Query:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        GKVHGS ARA KVRGQTPKVAKQDKKKKPRG AHKR+Q+NRRFVTAVVGF KKRGP S EK
Subjt:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK

P62860 40S ribosomal protein S309.1e-1571.93Show/hide
Query:  KVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKS
        KVHGS ARA KVRGQTPKVAKQ+KKKK  G A +RMQYNRRFV  V  F KK+GP +
Subjt:  KVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKS

P62861 40S ribosomal protein S309.1e-1571.93Show/hide
Query:  KVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKS
        KVHGS ARA KVRGQTPKVAKQ+KKKK  G A +RMQYNRRFV  V  F KK+GP +
Subjt:  KVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKS

P62862 40S ribosomal protein S309.1e-1571.93Show/hide
Query:  KVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKS
        KVHGS ARA KVRGQTPKVAKQ+KKKK  G A +RMQYNRRFV  V  F KK+GP +
Subjt:  KVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKS

P62866 40S ribosomal protein S309.1e-1571.93Show/hide
Query:  KVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKS
        KVHGS ARA KVRGQTPKVAKQ+KKKK  G A +RMQYNRRFV  V  F KK+GP +
Subjt:  KVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKS

Arabidopsis top hitse value%identityAlignment
AT2G19750.1 Ribosomal protein S30 family protein1.9e-2386.89Show/hide
Query:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        GKVHGS ARA KVRGQTPKVAKQDKKKKPRG AHKR+Q+NRRFVTAVVGF KKRGP S EK
Subjt:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK

AT4G29390.1 Ribosomal protein S30 family protein1.9e-2386.89Show/hide
Query:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        GKVHGS ARA KVRGQTPKVAKQDKKKKPRG AHKR+Q+NRRFVTAVVGF KKRGP S EK
Subjt:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK

AT5G56670.1 Ribosomal protein S30 family protein1.9e-2386.89Show/hide
Query:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK
        GKVHGS ARA KVRGQTPKVAKQDKKKKPRG AHKR+Q+NRRFVTAVVGF KKRGP S EK
Subjt:  GKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTGATTTATCTGTTTCTTCATCTCTGTAATCTACATTCAGGTAAGGTTCATGGATCTTCAGCTCGTGCCGATAAGGTGAGAGGCCAGACACCAAAGGTTGCTAA
ACAAGACAAGAAGAAGAAGCCACGAGGACATGCTCACAAACGGATGCAATACAACCGTAGATTCGTAACTGCCGTTGTTGGTTTCAGCAAGAAGAGAGGACCAAAGTCGT
TCGAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCTGATTTATCTGTTTCTTCATCTCTGTAATCTACATTCAGGTAAGGTTCATGGATCTTCAGCTCGTGCCGATAAGGTGAGAGGCCAGACACCAAAGGTTGCTAA
ACAAGACAAGAAGAAGAAGCCACGAGGACATGCTCACAAACGGATGCAATACAACCGTAGATTCGTAACTGCCGTTGTTGGTTTCAGCAAGAAGAGAGGACCAAAGTCGT
TCGAGAAGTAA
Protein sequenceShow/hide protein sequence
MFLIYLFLHLCNLHSGKVHGSSARADKVRGQTPKVAKQDKKKKPRGHAHKRMQYNRRFVTAVVGFSKKRGPKSFEK